Evidence map›Paper›PMID 39484381›Full record

ArticlebioRxiv : the preprint server for biology2024

An end-to-end model of active electrosensation.

Denis Turcu, Abigail Zadina, L F Abbott, Nathaniel B Sawtell

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Denis TurcuThe Mortimer B. Zuckerman Mind, Brain and Behavior Institute, Department of Neuroscience, Columbia University, New York, New York, United States of America.ORCID 0000-0002-2955-2568
Abigail ZadinaThe Mortimer B. Zuckerman Mind, Brain and Behavior Institute, Department of Neuroscience, Columbia University, New York, New York, United States of America.
L F AbbottThe Mortimer B. Zuckerman Mind, Brain and Behavior Institute, Department of Neuroscience, Columbia University, New York, New York, United States of America.
Nathaniel B SawtellThe Mortimer B. Zuckerman Mind, Brain and Behavior Institute, Department of Neuroscience, Columbia University, New York, New York, United States of America.

Funding

Roles for Granule Cells in Adaptive Processing in a Cerebellum-like CircuitR01NS075023 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ABBOTT, LAURENCE F., SAWTELL, NATHANIEL · 2012 to 2025
$5.8M
Understanding Multi-Layer Learning in a Biological CircuitRF1NS118448 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ABBOTT, LAURENCE F., SAWTELL, NATHANIEL · 2020 to 2020
$1.5M
Understanding Multi-Layer Learning in a Biological CircuitR01NS118448 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ABBOTT, LAURENCE F., SAWTELL, NATHANIEL · 2023 to 2024
$865k
NINDS NIH HHS R01 NS075023NINDS NIH HHS R01 NS118448NINDS NIH HHS RF1 NS118448
6 · The paper itself

Abstract

Weakly electric fish localize and identify objects by sensing distortions in a self-generated electric field. Fish can determine the resistance and capacitance of an object, for example, even though the field distortions being sensed are small and highly-dependent on object distance and size. Here we construct a model of the responses of the fish's electroreceptors on the basis of experimental data, and we develop a model of the electric fields generated by the fish and the distortions due to objects of different resistances and capacitances. This provides us with an accurate and efficient method for generating large artificial data sets simulating fish interacting with a wide variety of objects. Using these sets, we train an artificial neural network (ANN), representing brain areas downstream of electroreceptors, to extract the 3D location, size, and electrical properties of objects. The model performs best if the ANN operates in two stages: first estimating object distance and size and then using this information to extract electrical properties. This suggests a specific form of modularity in the electrosensory system that can be tested experimentally and highlights the potential of end-to-end modeling for studies of sensory processing.

Identifiers

PMID39484381
PMCPMC11526905

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.