Evidence map›Paper›PMID 39482762›Full record

ArticleOne health outlook2024

Low detection of H5N1 virus in commercial chickens with a low-level of vaccination coverage against H5N1 virus infection in Bangladesh.

Sukanta Chowdhury, Mohammad Enayet Hossain, Rashedul Hasan, Mojnu Miah, Sajal Kanti Biswas, Md Mahmudul Hasan, Probir Kumar Ghosh, Jenifar Quaiyum Ami, Akash Saha, Sumon Ghosh and 3 more

Abstract read
In one paragraph

Article in One health outlook, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sukanta ChowdhuryInternational Centre for Diarrheal Diseases Research, Bangladesh (icddr,b), Dhaka, Bangladesh. sukanta@icddrb.org.ORCID http://orcid.org/0000-0003-3053-4241
Mohammad Enayet HossainInternational Centre for Diarrheal Diseases Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Rashedul HasanDepartment of Chemistry and Biochemistry, New Mexico State University, Las Cruces, NM, USA.
Mojnu MiahDepartment of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, AR, 72205, USA.
Sajal Kanti BiswasInternational Centre for Diarrheal Diseases Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Md Mahmudul HasanThe Bredesen Center for Interdisciplinary Research and Graduate Education, The University of Tennessee, Knoxville, USA.
Probir Kumar GhoshInternational Centre for Diarrheal Diseases Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Jenifar Quaiyum AmiInternational Centre for Diarrheal Diseases Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Akash SahaInternational Centre for Diarrheal Diseases Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Sumon GhoshDepartment of Public Health, The University of Tennessee, Knoxville, USA.
Mahmudur RahmanEMPHNET, Dhaka, Bangladesh.
Fahmida ChowdhuryInternational Centre for Diarrheal Diseases Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Mohammed Ziaur RahmanInternational Centre for Diarrheal Diseases Research, Bangladesh (icddr,b), Dhaka, Bangladesh.

Funding

Centers for Disease Control and Prevention, USA 1U01GH001207-01CGH CDC HHS U01 GH001207
6 · The paper itself

Abstract

backgroundBangladesh has reported > 560 H5N1 outbreaks in poultry and eight human cases since 2007. Commercial chicken farms were mostly affected. Commercial chicken farms across the country use imported vaccines against H5N1 virus; however, these vaccines did not use local circulatory isolates of H5N1virus. Vaccination may have limited effectiveness in chicken because of the mismatch in terms of subtypes and clades. To test this, we conducted a mixed-method study to assess the impact of ongoing vaccination against H5N1 virus on H5N1 viral shedding through freshly dropped feces of chickens raised in commercial farms that exclusively vaccinated or did not vaccinate their chickens.

methodsInitially, we collected vaccination coverage data from all active farms in a subdistrict of each of eight division. In each district, 25 vaccinated and 25 non-vaccinated chicken farms were selected randomly for sample collection. All samples were tested to detect avian influenza viruses using rRT-PCR.

resultsA total of 5092 poultry farms were surveyed; among them 1284 (25%) chicken farms administered vaccine against H5N1 virus. In total 21 of 400 tested farms (5%) had chicken feces samples that tested positive for AIVs; of these three were positive for H5N1 subtype of clade 2.3.2.1. Out of three H5N1 positive farms, 1 (33%) was vaccinated and 2 (67%) were unvaccinated. The chicken farms that administered vaccine against H5N1 was found protective for the detection of H5N1 viral RNA (aOR 0.39, 95% CI: 0.32-0.48). The H5N1 isolates of clade 2.3.2.1 sequenced in this study formed a cluster with the vaccine strain A/duck/Guangdong/S1322/2010 (H5N1) [Re-6].

conclusionsThe overall low vaccination coverage with low detection of H5N1 virus in commercial chickens makes it difficult to assess the effectiveness of the vaccine in reducing H5N1 viral shedding.

Indexed as

BangladeshCommercial chickenH5N1HPAIVaccine

Identifiers

PMID39482762
PMCPMC11529421

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.