Evidence map›Paper›PMID 39482574›Full record

ArticleBMC plant biology2024

Proteomic analysis identified proteins that are differentially expressed in the flavonoid and carotenoid biosynthetic pathways of Camellia Nitidissima flowers.

Xing-Wen Zhou, Xiao-Xia Ye, Bao-Jian Ye, Shi-Hong Yan, Hai-Bin Hu, Qiu-Yuan Xu, Xiong Yao, He-Xia Liu, Bo Li, Yi-Qing Xie and 1 more

Abstract read
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Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xing-Wen Zhou *College of Architecture and Urban Planning, Fujian University of Technology, Fuzhou, 350118, China.
Xiao-Xia Ye *College of Biology and Pharmacy, Yulin Normal University, Yulin, 537000, China.
Bao-Jian YeCollege of Architecture and Urban Planning, Fujian University of Technology, Fuzhou, 350118, China.
Shi-Hong YanCollege of Architecture and Urban Planning, Fujian University of Technology, Fuzhou, 350118, China.
Hai-Bin HuCollege of Architecture and Urban Planning, Fujian University of Technology, Fuzhou, 350118, China.
Qiu-Yuan XuCollege of Architecture and Urban Planning, Fujian University of Technology, Fuzhou, 350118, China.
Xiong YaoCollege of Architecture and Urban Planning, Fujian University of Technology, Fuzhou, 350118, China.
He-Xia LiuCollege of Biology and Pharmacy, Yulin Normal University, Yulin, 537000, China.
Bo LiCollege of Biology and Pharmacy, Yulin Normal University, Yulin, 537000, China. lbshaojianbo@ylu.edu.cn.
Yi-Qing XieInstitute of Economic Forestry, Fujian Academy of Forestry, Fuzhou, 350012, China. fjly168@sina.com.
Zhong-Jian LiuKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.

Funding

Foundation for Innovative Research Groups of the National Natural Science Foundation of China 31860228Fujian forestry science and technology project ZMGG-0702the Key Program of Guangxi Nature Science Foundation 2018GXNSFDA281007the project of improving the research capabilities of young and middle-aged teachers in Guangxi Zhuang Autonomous Region 2022KY0577the project of scientific research foundation in Yulin Normal University G2019ZK13, G2019ZK35the scientific research foundation project of Fujian University of Technology GY-Z22041
6 · The paper itself

Abstract

backgroundCamellia nitidissima Chi is a popular ornamental plant because of its golden flowers, which contain flavonoids and carotenoids. To understand the regulatory mechanism of golden color formation, the metabolites of C. nitidissima petals at five different developmental stages were detected, a proteome map of petals was first constructed via tandem mass tag (TMT) analysis, and the accuracy of the sequencing data was validated via parallel reaction monitoring (PRM).

resultsNineteen color components were detected, and most of these components were carotenoids that gradually accumulated, while some metabolites were flavonoids that were gradually depleted. A total of 97,647 spectra were obtained, and 6,789 quantifiable proteins were identified. Then, 1,319 differentially expressed proteins (DEPs) were found, 55 of which belong to the flavonoid and carotenoid pathways, as revealed by pairwise comparisons of protein expression levels across the five developmental stages. Notably, most DEPs involved in the synthesis of flavonoids, such as phenylalanine ammonium lyase and 4-coumarate-CoA ligase, were downregulated during petal development, whereas DEPs involved in carotenoid synthesis, such as phytoene synthase, 1-deoxy-D-xylulose-5-phosphate synthase, and β-cyclase, tended to be upregulated. Furthermore, protein‒protein interaction (PPI) network analysis revealed that these 55 DEPs formed two distinct PPI networks closely tied to the flavonoid and carotenoid synthesis pathways. Phytoene synthase and chalcone synthase exhibited extensive interactions with numerous other proteins and displayed high connectivity within the PPI networks, suggesting their pivotal biological functions in flavonoid and carotenoid biosynthesis.

conclusionProteomic data on the flavonoid and carotenoid biosynthesis pathways were obtained, and the regulatory roles of the DEPs were analyzed, which provided a theoretical basis for further understanding the golden color formation mechanism of C. nitidissima.

Indexed as

CamelliaCarotenoidsFlavonoidsFlowersPlant ProteinsProteomicsBiosynthetic PathwaysGene Expression Regulation, PlantProteomeCarotenoidsFlavonoidsPlant ProteinsProteomeCamellia NitidissimaFlower colorMetabolic pathwayMetabolitesProteomeTandem mass tag (TMT)

Identifiers

PMID39482574
PMCPMC11529430

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.