Evidence map›Paper›PMID 39482525›Full record

ArticleScientific reports2024

Noninvasive, epigenetic age estimation in an elasmobranch, the cownose ray (Rhinoptera bonasus).

D Nick Weber, Jennifer T Wyffels, Chris Buckner, Robert George, F Ed Latson, Véronique LePage, Kady Lyons, David S Portnoy

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Insights from three decades of IUCN Red List assessments catalyzing shark, ray, and chimaera conservation.Conservation biology : the journal of the Society for Conservation Biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

D Nick WeberMarine Genomics Laboratory, Department of Life Sciences, Texas A&M University-Corpus Christi, Corpus Christi, TX, 78412, USA. dweber@islander.tamucc.edu.
Jennifer T WyffelsRipley's Aquariums, Orlando, FL, 32819, USA.
Chris BucknerRipley's Aquarium of Myrtle Beach, Myrtle Beach, SC, 29577, USA.
Robert GeorgeRipley's Aquarium of the Smokies, Gatlinburg, TN 37738, USA, Gatlinburg, TN, 37738, USA.
F Ed LatsonRipley's Aquarium of Canada, Buffalo, NY , 14225, USA.
Véronique LePageRipley's Aquarium of Canada, Toronto, ON, M5V 3L9, Canada.
Kady LyonsCenter for Species Survival, Georgia Aquarium, Atlanta, GA , 30313, USA.
David S PortnoyMarine Genomics Laboratory, Department of Life Sciences, Texas A&M University-Corpus Christi, Corpus Christi, TX, 78412, USA. david.portnoy@tamucc.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Age data are essential for estimating life history parameters and are thus critical for population assessment, management, and conservation. Traditional vertebrae-based age estimation in elasmobranchs can be costly, time intensive, of low accuracy, and is by necessity lethal. Herein, epigenetic clocks were developed for an elasmobranch, the cownose ray (Rhinoptera bonasus), using aquarium-born individuals (n = 42) with known dates of birth (age range: 7-7,878 days or 0-21 years) and two tissue types (fin clips and whole blood) that can be sampled in a relatively non-invasive manner. Enzymatically-converted restriction site-associated DNA sequencing (ECrad-seq) was used to identify CpG sites that exhibited age-correlated DNA methylation. The epigenetic clocks developed were highly accurate (mean absolute error, MAE, < 0.75 years) and precise (R

Indexed as

CpG IslandsDNA MethylationEpigenesis, GeneticSkates, FishAgingAnimalsSequence Analysis, DNAAgeingDNA methylationEpigenetic clockMulti-tissueRaysSharks

Identifiers

PMID39482525
PMCPMC11528000

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.