Evidence map›Paper›PMID 39482307›Full record

ArticleNature communications2024

The dual life of disordered lysine-rich domains of snoRNPs in rRNA modification and nucleolar compaction.

Carine Dominique, Nana Kadidia Maiga, Alfonso Méndez-Godoy, Benjamin Pillet, Hussein Hamze, Isabelle Léger-Silvestre, Yves Henry, Virginie Marchand, Valdir Gomes Neto, Christophe Dez and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Biomolecular Condensates Can Induce Local Membrane Potentials.Small (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Carine Dominique *Molecular, Cellular and Developmental (MCD) Unit, Centre for Integrative Biology (CBI), CNRS, University of Toulouse, UPS, Toulouse, France.
Nana Kadidia Maiga *Molecular, Cellular and Developmental (MCD) Unit, Centre for Integrative Biology (CBI), CNRS, University of Toulouse, UPS, Toulouse, France.
Alfonso Méndez-GodoyDepartment of Biology, University of Fribourg, Fribourg, Switzerland.ORCID 0009-0009-4200-0854
Benjamin PilletDepartment of Biology, University of Fribourg, Fribourg, Switzerland.ORCID 0000-0002-7313-4304
Hussein HamzeMolecular, Cellular and Developmental (MCD) Unit, Centre for Integrative Biology (CBI), CNRS, University of Toulouse, UPS, Toulouse, France.ORCID 0009-0002-7737-0280
Isabelle Léger-SilvestreMolecular, Cellular and Developmental (MCD) Unit, Centre for Integrative Biology (CBI), CNRS, University of Toulouse, UPS, Toulouse, France.
Yves HenryMolecular, Cellular and Developmental (MCD) Unit, Centre for Integrative Biology (CBI), CNRS, University of Toulouse, UPS, Toulouse, France.
Virginie MarchandCNRS-Université de Lorraine, UAR2008 IBSLor/UMR7365 IMoPA, Nancy, France.ORCID 0000-0002-8537-1139
Valdir Gomes NetoDepartment of Biochemistry, Institute of Chemistry, University of São Paulo, São Paulo, Brazil.ORCID 0000-0002-9412-4930
Christophe DezMolecular, Cellular and Developmental (MCD) Unit, Centre for Integrative Biology (CBI), CNRS, University of Toulouse, UPS, Toulouse, France.
Yuri MotorinCNRS-Université de Lorraine, UAR2008 IBSLor/UMR7365 IMoPA, Nancy, France.
Dieter KresslerDepartment of Biology, University of Fribourg, Fribourg, Switzerland. dieter.kressler@unifr.ch.ORCID 0000-0003-4855-3563
Olivier GadalMolecular, Cellular and Developmental (MCD) Unit, Centre for Integrative Biology (CBI), CNRS, University of Toulouse, UPS, Toulouse, France. olivier.gadal@univ-tlse3.fr.ORCID 0000-0001-9421-0831
Anthony K HenrasMolecular, Cellular and Developmental (MCD) Unit, Centre for Integrative Biology (CBI), CNRS, University of Toulouse, UPS, Toulouse, France. anthony.henras@univ-tlse3.fr.ORCID 0000-0001-7785-9938
Benjamin AlbertMolecular, Cellular and Developmental (MCD) Unit, Centre for Integrative Biology (CBI), CNRS, University of Toulouse, UPS, Toulouse, France. benjamin.albert@univ-tlse3.fr.ORCID 0000-0003-2122-6458

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-21-CE12-0008-01
6 · The paper itself

Abstract

Intrinsically disordered regions (IDRs) are highly enriched in the nucleolar proteome but their physiological role in ribosome assembly remains poorly understood. Our study reveals the functional plasticity of the extremely abundant lysine-rich IDRs of small nucleolar ribonucleoprotein particles (snoRNPs) from protists to mammalian cells. We show in Saccharomyces cerevisiae that the electrostatic properties of this lysine-rich IDR, the KKE/D domain, promote snoRNP accumulation in the vicinity of nascent rRNAs, facilitating their modification. Under stress conditions reducing the rate of ribosome assembly, they are essential for nucleolar compaction and sequestration of key early-acting ribosome biogenesis factors, including RNA polymerase I, owing to their self-interaction capacity in a latent, non-rRNA-associated state. We propose that such functional plasticity of these lysine-rich IDRs may represent an ancestral eukaryotic regulatory mechanism, explaining how nucleolar morphology is continuously adapted to rRNA production levels.

Indexed as

Cell NucleolusLysineRibonucleoproteins, Small NucleolarRNA, RibosomalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsHumansIntrinsically Disordered ProteinsProtein DomainsRibosomesRNA Polymerase IIntrinsically Disordered ProteinsLysineRibonucleoproteins, Small NucleolarRNA Polymerase IRNA, RibosomalSaccharomyces cerevisiae Proteins

Identifiers

PMID39482307
PMCPMC11528048

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.