Evidence map›Paper›PMID 39480863›Full record

ArticlePloS one2024

Exploring the interplay between Porphyromonas gingivalis KGP gingipain, herpes virus MicroRNA-6, and Icp4 transcript in periodontitis: Computational and clinical insights.

Pradeep Kumar Yadalam, Anila Neelakandan, Rex Arunraj, Raghavendra Vamsi Anegundi, Carlos M Ardila

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Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
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4citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Pradeep Kumar YadalamDepartment of Periodontics, Saveetha Dental College, Saveetha Institute of Medical and technology sciences, SIMATS, Saveetha University, Chennai, Tamil Nadu, India.
Anila NeelakandanClover Medical Center, Dubai, United Arab Emirates.
Rex ArunrajDepartment of Genetic Engineering, School of Bioengineering, SRM Institute of Science and Technology, Kanchipuram, Tamil Nadu, India.
Raghavendra Vamsi AnegundiDepartment of Periodontics, Saveetha Dental College, Saveetha Institute of Medical and technology sciences, SIMATS, Saveetha University, Chennai, Tamil Nadu, India.
Carlos M ArdilaBasic Sciences Department, Faculty of Dentistry, Universidad de Antioquia U de A, Medellín, Colombia.ORCID 0000-0002-3663-1416

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPorphyromonas gingivalis, a major pathogen in periodontitis, produces KGP (Lys-gingipain), a cysteine protease that enhances bacterial virulence by promoting tissue invasion and immune evasion. Recent studies highlight microRNAs' role in viral latency, potentially affecting lytic replication through host mechanisms. Herpes virus (HSV) establishes latency via interactions between microRNA-6 (miRH-6) and the ICP4 transcription factor in neural ganglia. This suggests a potential link between periodontitis and HSV-induced latency. This study aims to identify and validate the insilico inhibitory interaction of P. gingivalis KGP with ICP4 transcripts and correlate the presence of viral latency-associated transcript micro-RNA-6 with periodontitis.

methodsComputational docking analysis was performed to investigate the potential interaction between ICP4 and KGP gingipain. The binding energy and RMSD ligand values were calculated to determine the interaction's strength. Ten patients with recurrent clinical attachment loss despite conventional therapy were included in the clinical study. Subgingival tissue samples were collected post-phase I therapy, and HSV microRNA-6 presence was detected via polymerase chain reaction and confirmed through gel electrophoresis.

resultsComputational docking identified the ICP4-KGP gingipain complex with the lowest binding energy (-288.29 kJ mol^1) and an RMSD ligand of 1.5 Angstroms, indicating strong interaction potential. Gel electrophoresis confirmed miRH-6 presence in all samples.

conclusionThe identification of miRNA-6 in periodontitis patients and the strong interaction potential between P. gingivalis KGP gingipain and ICP4 transcripts indicate a possible link between bacterial virulence factors and viral latency dynamics in periodontal tissues. These results highlight the complex interplay between oral pathogens, viral microRNAs, and host immune responses in periodontitis.

Indexed as

Adhesins, BacterialGingipain Cysteine EndopeptidasesMicroRNAsMolecular Docking SimulationPeriodontitisPorphyromonas gingivalisAdultCysteine EndopeptidasesFemaleHerpesvirus 1, HumanHumansImmediate-Early ProteinsMaleUbiquitin-Protein LigasesVirus LatencyAdhesins, BacterialCysteine EndopeptidasesGingipain Cysteine Endopeptidasesherpes simplex virus, type 1 protein ICP4Immediate-Early ProteinsMicroRNAsUbiquitin-Protein Ligases

Identifiers

PMID39480863
PMCPMC11527181

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.