Evidence map›Paper›PMID 39478877›Full record

ReviewPhysical sciences reviews2024

The workshops on computational applications in secondary metabolite discovery (CAiSMD).

Fidele Ntie-Kang, Donatus B Eni, Kiran K Telukunta, Victor Chukwudi Osamor, Samuel A Egieyeh, Miquel Duran-Frigola, Pankaj Mishra, Daniel M Shadrack, Lucas Paul, Thommas M Musyoka and 20 more

Abstract readReview
PubMed Full text at PMC Publisher
In one paragraph

Review in Physical sciences reviews, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Fidele Ntie-KangCenter for Drug Discovery, University of Buea, P. O. Box 63 Buea, Cameroon.
Donatus B EniCenter for Drug Discovery, University of Buea, P. O. Box 63 Buea, Cameroon.
Kiran K TelukuntaTarunavadaanenasaha Muktbharatonnayana Samstha Foundation, Hyderabad, India.ORCID https://orcid.org/0000-0002-3219-9240
Victor Chukwudi OsamorDepartment of Computer and Information Sciences, Covenant University, Ota, Nigeria.
Samuel A EgieyehSchool of Pharmacy, University of the Western Cape, Cape Town, 7535 South Africa.
Miquel Duran-FrigolaErsilia Open Source Initiative, Cambridge, UK.
Pankaj MishraDepartment of Education, Uresearcher Growth Labs Private Limited, 2/44-45, Wazir Hasan Road, Lucknow, Uttar Pradesh 226001, India.
Daniel M ShadrackDepartment of Chemistry, St. John's University of Tanzania, P. O. Box 47 Dodoma, Tanzania.
Lucas PaulDepartment of Chemistry, Dar es Salaam University College of Education (DUCE), P. O. Box 2329 Dar es Salaam, Tanzania.
Thommas M MusyokaDepartment of Biochemistry, Microbiology and Biotechnology, Kenyatta University, Nairobi, Kenya.
Kai BlinThe Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark.
Mai M FaridDepartment of Phytochemistry and Plant Systematics, Pharmaceutical and Drug Industries Research Institute, National Research Center, Cairo, Egypt.
Ya ChenDepartment of Pharmaceutical Sciences, Division of Pharmaceutical Chemistry, Faculty of Life Sciences, University of Vienna, 1090 Vienna, Austria.
Lucie Karelle DjogangDepartment of Inorganic Chemistry, University of Yaounde I, Yaounde, Cameroon.
Jude Y BetowCenter for Drug Discovery, University of Buea, P. O. Box 63 Buea, Cameroon.
Akachukwu IbezimDepartment of Pharmaceutical and Medicinal Chemistry, Faculty of Pharmaceutical Sciences, University of Nigeria, Nsukka, Nigeria.
Darshana JoshiTarunavadaanenasaha Muktbharatonnayana Samstha Foundation, Hyderabad, India.
Alanis T EdwinTarunavadaanenasaha Muktbharatonnayana Samstha Foundation, Hyderabad, India.
Mary A ChamaDepartment of Chemistry, School of Physical and Mathematical Sciences, University of Ghana, Accra, Ghana.
Jean Moto OngagnaDepartment of Chemistry, University of Douala, Douala, Cameroon.
Pierre Valery Kemdoum SindaDepartment of Chemistry, University of Dschang, Dschang, Cameroon.
Jonathan A MetugeDepartment of Natural Resources and Environmental Sciences, Alabama A & M University, Huntsville, USA.
Boris D BekonoDepartment of Physics, Ecole Normale Supérieure, University of Yaoundé I, BP. 47, Yaoundé, Cameroon.
Mustafa A IsaBioinformatics and Computational Biology Lab, Department of Microbiology, Faculty of Sciences, University of Maiduguri, P.M.B. 1069, Maiduguri, Borno State, Nigeria.
José L Medina-FrancoDIFACQUIM Research Group, Department of Pharmacy, School of Chemistry, Universidad Nacional Autónoma de Mexico, Mexico City 04510, Mexico.
Tilmann WeberThe Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark.
Pieter C DorresteinSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, MC 0751, La Jolla, CA 92093-0751, USA.
Dusanka JanezicFaculty of Mathematics, Natural Sciences and Information Technologies, University of Primorska, Glagoljaška 8, SI-6000 Koper, Slovenia.
Özlem Tastan BishopResearch Unit in Bioinformatics (RUBi), Department of Biochemistry and Microbiology, Rhodes University, Makhanda, 6140, South Africa.
Jutta Ludwig-MüllerFaculty of Biology, Technische Universität Dresden, Zellescher Weg 20b, 01062 Dresden, Germany.

Funding

Gates Foundation INV-036848
6 · The paper itself

Abstract

We report the outcomes of the second session of the free online open-access workshop "Computational Applications in Secondary Metabolite Discovery (CAiSMD) 2022" that took place from 09 to 11 March 2022. The first session was held from 08 to 10 March 2021 and drew the attention of many early career scientists from academia and industry. The 23 invited speakers of this year's workshop also came from academia and industry and 222 registered participants from five continents (Africa, Asia, Europe, South, and North America) took part in the workshop. The workshop highlighted the potential applications of computational methodologies in the search for secondary metabolites or natural products as drug candidates and drug leads. For three days, the participants of this online workshop discussed modern computer-based approaches for exploring NP discovery in the "omics" age. The invited experts gave keynote lectures, trained participants in hands-on sessions, and held round table discussions. These were followed by oral presentations during which much interaction between the speakers and the audience was observed. Selected applicants (early-career scientists) were offered the opportunity to give oral presentations (15 min) upon submission of an abstract. The final program available on the workshop website (https://indiayouth.info/index.php/caismd) comprised three keynote lectures, 14 oral presentations, two round table discussions, and four hands-on sessions. This meeting report also references internet resources for computational biology around secondary metabolites that are of use outside of the workshop areas and will constitute a long-term valuable source for the community.

Indexed as

bioinformaticschemoinformaticsopen sciencepredictionssecondary metabolitesweb tools

Identifiers

PMID39478877
PMCPMC11519840

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.