Evidence map›Paper›PMID 39478142›Full record

ArticleCommunications biology2024

Universal prediction of vertebrate species age at maturity.

Alyssa M Budd, Suk Yee Yong, Matthew J Heydenrych, Benjamin Mayne, Oliver Berry, Simon Jarman

Abstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Epigenetic clocks and programmatic aging.Ageing research reviews · 2024
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alyssa M BuddEnvironomics Future Science Platform, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Crawley, WA, Australia. alyssa.budd@csiro.au.ORCID 0000-0002-2372-7603
Suk Yee YongCSIRO Information Management & Technology (IM&T) Scientific Computing, Eveleigh, NSW, Australia.ORCID 0000-0002-5204-2902
Matthew J HeydenrychEnvironomics Future Science Platform, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Crawley, WA, Australia.
Benjamin MayneEnvironomics Future Science Platform, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Crawley, WA, Australia.
Oliver BerryEnvironomics Future Science Platform, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Crawley, WA, Australia.ORCID 0000-0001-7545-5083
Simon JarmanEnvironomics Future Science Platform, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Crawley, WA, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Animal age at maturity can be used as a universal and simple predictor of species extinction risk. At present, methods to estimate age at maturity are typically species-specific, limiting comparisons among species, or are infeasible due to practical constraints. To overcome this, here we develop a universal predictor of species-level age at maturity for vertebrates. We show that modelling the frequency of 'CG' sequences (CpG sites) in gene promoter regions yields rapid predictions of vertebrate age at maturity. Our models predict age at maturity with remarkable accuracy and generalisability, with median error rates of 30% (less than 1 year) and are robust to genome assemblies of varying quality. We generate predictions for 1912 vertebrate species for which age at maturity estimates were previously absent from public databases. The predictions can be used to help to inform management decisions for the many species for which more detailed population information is currently unavailable.

Indexed as

VertebratesAgingAnimalsPromoter Regions, GeneticSpecies Specificity

Identifiers

PMID39478142
PMCPMC11526025

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.