Evidence map›Paper›PMID 39478140›Full record

ArticleScientific reports2024

A large scale multi institutional study for radiomics driven machine learning for meningioma grading.

Mert Karabacak, Shiv Patil, Rui Feng, Raj K Shrivastava, Konstantinos Margetis

Abstract readMulticenter Study
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Advancements in the application of MRI radiomics in meningioma.Radiation oncology (London, England) · 2025
    Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Mert KarabacakDepartment of Neurosurgery, Mount Sinai Health System, New York, NY, USA.
Shiv PatilSidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.
Rui FengDepartment of Neurosurgery, Mount Sinai Health System, New York, NY, USA.
Raj K ShrivastavaDepartment of Neurosurgery, Mount Sinai Health System, New York, NY, USA.
Konstantinos MargetisDepartment of Neurosurgery, Mount Sinai Health System, New York, NY, USA. Konstantinos.Margetis@mountsinai.org.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aims to develop and evaluate radiomics-based machine learning (ML) models for predicting meningioma grades using multiparametric magnetic resonance imaging (MRI). The study utilized the BraTS-MEN dataset's training split, including 698 patients (524 with grade 1 and 174 with grade 2-3 meningiomas). We extracted 4872 radiomic features from T1, T1 with contrast, T2, and FLAIR MRI sequences using PyRadiomics. LASSO regression reduced features to 176. The data was split into training (60%), validation (20%), and test (20%) sets. Five ML algorithms (TabPFN, XGBoost, LightGBM, CatBoost, and Random Forest) were employed to build models differentiating low-grade (grade 1) from high-grade (grade 2-3) meningiomas. Hyperparameter tuning was performed using Optuna, optimizing model-specific parameters and feature selection. The CatBoost model demonstrated the best performance, achieving an area under the receiver operating characteristic curve (AUROC) of 0.838 [95% confidence interval (CI): 0.689-0.935], precision of 0.492 (95% CI: 0.371-0.623), recall of 0.838 (95% CI: 0.689-0.935), F1 score of 0.620 (95% CI: 0.495-0.722), accuracy of 0.729 (95% CI: 0.650-0.800), an area under the precision-recall curve (AUPRC) of 0.620 (95% CI: 0.433-0.753), and Brier score of 0.156 (95% CI: 0.122-0.200). Other models showed comparable performance, with mean AUROCs ranging from 0.752 to 0.784. The radiomics-based ML approach presented in this study showcases the potential for non-invasive and pre-operative grading of meningiomas using multiparametric MRI. Further validation on larger and independent datasets is necessary to establish the robustness and generalizability of these findings.

Indexed as

Machine LearningMeningeal NeoplasmsMeningiomaNeoplasm GradingAdultAgedAlgorithmsFemaleHumansMagnetic Resonance ImagingMaleMiddle AgedMultiparametric Magnetic Resonance ImagingRadiomicsROC CurveGradingMachine learningMeningiomaMRIRadiomics

Identifiers

PMID39478140
PMCPMC11525589

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.