Evidence map›Paper›PMID 39477961›Full record

ArticleNature communications2024

High-parametric protein maps reveal the spatial organization in early-developing human lung.

Sanem Sariyar, Alexandros Sountoulidis, Jan Niklas Hansen, Sergio Marco Salas, Mariya Mardamshina, Anna Martinez Casals, Frederic Ballllosera Navarro, Zaneta Andrusivova, Xiaofei Li, Paulo Czarnewski and 7 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Endothelial Continuum and Capillary Specialization in Pulmonary Vascular Development.Arteriosclerosis, thrombosis, and vascular biology · 2026
    Review
  2. Spatial architecture of development and disease.Nature reviews. Genetics · 2026
    Review
  3. Multi-omics to study chronic respiratory diseases and viral infections.European respiratory review : an official journal of the European Respiratory Society · 2026
    Review
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Sanem SariyarScience for Life Laboratory, Solna, Sweden.
Alexandros SountoulidisScience for Life Laboratory, Solna, Sweden.
Jan Niklas HansenScience for Life Laboratory, Solna, Sweden.ORCID 0000-0002-0489-7535
Sergio Marco SalasScience for Life Laboratory, Solna, Sweden.ORCID 0000-0002-4636-0322
Mariya MardamshinaScience for Life Laboratory, Solna, Sweden.
Anna Martinez CasalsScience for Life Laboratory, Solna, Sweden.
Frederic Ballllosera NavarroScience for Life Laboratory, Solna, Sweden.
Zaneta AndrusivovaScience for Life Laboratory, Solna, Sweden.
Xiaofei LiDepartment of Neurobiology, Care Sciences and Society, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-9991-7534
Paulo CzarnewskiScience for Life Laboratory, Solna, Sweden.
Joakim LundebergScience for Life Laboratory, Solna, Sweden.ORCID 0000-0003-4313-1601
Sten LinnarssonDepartment of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm, Sweden.ORCID 0000-0002-3491-3444
Mats NilssonScience for Life Laboratory, Solna, Sweden.ORCID 0000-0001-9985-0387
Erik SundströmDepartment of Neurobiology, Care Sciences and Society, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0003-2931-8015
Christos SamakovlisScience for Life Laboratory, Solna, Sweden.
Emma Lundberg *Science for Life Laboratory, Solna, Sweden. emma.lundberg@scilifelab.se.ORCID 0000-0001-7034-0850
Burcu Ayoglu *Science for Life Laboratory, Solna, Sweden. burcu.ayoglu@scilifelab.se.ORCID 0000-0001-7843-2960

Funding

Familjen Erling-Perssons Stiftelse (Erling-Persson Family Foundation) HDCAKnut och Alice Wallenbergs Stiftelse (Knut and Alice Wallenberg Foundation) 2018.0172Vetenskapsrådet (Swedish Research Council) 2022-04732
6 · The paper itself

Abstract

The respiratory system, including the lungs, is essential for terrestrial life. While recent research has advanced our understanding of lung development, much still relies on animal models and transcriptome analyses. In this study conducted within the Human Developmental Cell Atlas (HDCA) initiative, we describe the protein-level spatiotemporal organization of the lung during the first trimester of human gestation. Using high-parametric tissue imaging with a 30-plex antibody panel, we analyzed human lung samples from 6 to 13 post-conception weeks, generating data from over 2 million cells across five developmental timepoints. We present a resource detailing spatially resolved cell type composition of the developing human lung, including proliferative states, immune cell patterns, spatial arrangement traits, and their temporal evolution. This represents an extensive single-cell resolved protein-level examination of the developing human lung and provides a valuable resource for further research into the developmental roots of human respiratory health and disease.

Indexed as

LungFemaleHumansPregnancyPregnancy Trimester, FirstSingle-Cell Analysis

Identifiers

PMID39477961
PMCPMC11525936

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.