Evidence map›Paper›PMID 39477930›Full record

ArticleNature communications2024

PilY1 regulates the dynamic architecture of the type IV pilus machine in Pseudomonas aeruginosa.

Shuaiqi Guo, Yunjie Chang, Yves V Brun, P Lynne Howell, Lori L Burrows, Jun Liu

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. β-strand addition within tip initiation complexes licenses assembly of diverse type IV filaments.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  7. mBio · 2026
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  18. Stimulation of themBio · 2025
    Article
  19. Separation ofmBio · 2025
    Article
  20. Electron Cryo-Tomography Reveals thebioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shuaiqi GuoDepartment of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT, 06536, USA. shuaiqi.guo@mcgill.ca.ORCID 0000-0001-5763-8513
Yunjie ChangDepartment of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT, 06536, USA.
Yves V BrunDépartement de Microbiologie, Infectiologie et Immunologie, Université de Montréal, Montréal, QC, Canada.ORCID 0000-0002-9289-1909
P Lynne HowellDepartment of Biochemistry, University of Toronto, Toronto, Canada.ORCID 0000-0002-2776-062X
Lori L BurrowsDavid Braley Center for Antibiotic Discovery, Michael G. DeGroote Institute for Infectious Disease Research, Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, ON, Canada. lori.burrows@mcmaster.ca.ORCID 0000-0003-0838-5040
Jun LiuDepartment of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT, 06536, USA. jliu@yale.edu.ORCID 0000-0003-3108-6735

Funding

Structure-Function Relationships in the Spirochetal Flagellar MotorR01AI087946 · NIAID · YALE UNIVERSITY · PI LIU, JUN · 2010 to 2025
$6.6M
Delineation of unique flagellar proteins in spirochetesR01AI132818 · NIAID · EAST CAROLINA UNIVERSITY · PI Jun Liu, MD A MOTALEB · 2018 to 2026
$3.3M
Functional and Structural Analysis of the Dot/Icm Type IVB Secretion MachineR01AI152421 · NIAID · YALE UNIVERSITY · PI LIU, JUN, ROY, CRAIG R. · 2020 to 2024
$2.9M
High-throughput electron cryo-microscopeS10OD023603 · OD · YALE UNIVERSITY · PI SIGWORTH, FREDERICK J · 2018 to 2018
$1.9M
Gouvernement du Canada | Canadian Institutes of Health Research (Instituts de Recherche en Santé du Canada) 458773NIAID NIH HHS R01 AI087946NIAID NIH HHS R01 AI132818NIAID NIH HHS R01 AI152421NIH HHS S10 OD023603
6 · The paper itself

Abstract

Type IV pili (T4P) produced by the pathogen Pseudomonas aeruginosa play a pivotal role in adhesion, surface motility, biofilm formation, and infection in humans. Despite the significance of T4P as a potential therapeutic target, key details of their dynamic assembly and underlying molecular mechanisms of pilus extension and retraction remain elusive, primarily due to challenges in isolating intact T4P machines from the bacterial cell envelope. Here, we combine cryo-electron tomography with subtomogram averaging and integrative modelling to resolve in-situ architectural details of the dynamic T4P machine in P. aeruginosa cells. The T4P machine forms 7-fold symmetric cage-like structures anchored in the cell envelope, providing a molecular framework for the rapid exchange of major pilin subunits during pilus extension and retraction. Our data suggest that the T4P adhesin PilY1 forms a champagne-cork-shaped structure, effectively blocking the secretin channel in the outer membrane whereas the minor-pilin complex in the periplasm appears to contact PilY1 via the central pore of the secretin gate. These findings point to a hypothetical model where the interplay between the secretin protein PilQ and the PilY1-minor-pilin priming complex is important for optimizing conformations of the T4P machine in P. aeruginosa, suggesting a gate-keeping mechanism that regulates pilus dynamics.

Indexed as

Fimbriae, BacterialFimbriae ProteinsPseudomonas aeruginosaCryoelectron MicroscopyElectron Microscope TomographyModels, MolecularFimbriae ProteinsPilY1 protein, Pseudomonas aeruginosa

Identifiers

PMID39477930
PMCPMC11525922

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.