Evidence map›Paper›PMID 39476278›Full record

ArticleArchives of virology2024

Sheeppox virus genome sequences from the European outbreaks in Spain, Bulgaria, and Greece in 2022-2024.

Floris C Breman, Andy Haegeman, Wannes Philips, Nina Krešić, Stefan Hoffman, Sigrid C J De Keersmaecker, Nancy H C Roosens, Montserrat Agüero, Ruben Villalba, Aleksandra Miteva and 5 more

Abstract read
In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Floris C BremanSciensano (Belgium), Service of 'Exotic and Vector borne diseases' (ExoVec), Groeselenberg 99, 1180, Ukkel, Belgium. floris.breman@sciensano.be.ORCID http://orcid.org/0000-0002-9722-7564
Andy HaegemanSciensano (Belgium), Service of 'Exotic and Vector borne diseases' (ExoVec), Groeselenberg 99, 1180, Ukkel, Belgium.ORCID http://orcid.org/0000-0003-4056-214X
Wannes PhilipsSciensano (Belgium), Service of 'Exotic and Vector borne diseases' (ExoVec), Groeselenberg 99, 1180, Ukkel, Belgium.
Nina KrešićSciensano (Belgium), Service of 'Exotic and Vector borne diseases' (ExoVec), Groeselenberg 99, 1180, Ukkel, Belgium.
Stefan HoffmanSciensano (Belgium), 'Transversal activities in Applied Genomics' (TAG), Juliette Wytsmanstraat, 14 - 1050, Elsene, Belgium.
Sigrid C J De KeersmaeckerSciensano (Belgium), 'Transversal activities in Applied Genomics' (TAG), Juliette Wytsmanstraat, 14 - 1050, Elsene, Belgium.
Nancy H C RoosensSciensano (Belgium), 'Transversal activities in Applied Genomics' (TAG), Juliette Wytsmanstraat, 14 - 1050, Elsene, Belgium.
Montserrat AgüeroLaboratorio Central de Veterinaria, Ministry of Agriculture, Fisheries and Food, 28110, Algete, Spain.
Ruben VillalbaLaboratorio Central de Veterinaria, Ministry of Agriculture, Fisheries and Food, 28110, Algete, Spain.
Aleksandra MitevaBulgarian Food Safety Agency, Bulevard Pencho Slaveikov 15 A, Sofia, 1606, Bulgaria.
Emiliya IvanovaBulgarian Food Safety Agency, Bulevard Pencho Slaveikov 15 A, Sofia, 1606, Bulgaria.
Konstantia E TasioudiGreek National Reference Laboratory for Capripoxviruses, Department of Molecular Diagnostics, FMD, Virological, Rickettsial & Exotic diseases, Directorate of Veterinary Center of Athens, Ministry of Rural Development and Food, 25, Neapoleos str, Agia Paraskevi, 15341, Athens, Greece.
Serafeim C ChaintoutisGreek National Reference Laboratory for Capripoxviruses, Department of Molecular Diagnostics, FMD, Virological, Rickettsial & Exotic diseases, Directorate of Veterinary Center of Athens, Ministry of Rural Development and Food, 25, Neapoleos str, Agia Paraskevi, 15341, Athens, Greece.
Aikaterini KirtzalidouGreek National Reference Laboratory for Capripoxviruses, Department of Molecular Diagnostics, FMD, Virological, Rickettsial & Exotic diseases, Directorate of Veterinary Center of Athens, Ministry of Rural Development and Food, 25, Neapoleos str, Agia Paraskevi, 15341, Athens, Greece.
Nick De ReggeSciensano (Belgium), Service of 'Exotic and Vector borne diseases' (ExoVec), Groeselenberg 99, 1180, Ukkel, Belgium.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In 2022-2024, three outbreaks of sheeppox (SPP) were reported in the European Union. These occurred in Spain, Bulgaria, and Greece and had serious economic consequences due to animal losses and trade restrictions. Five sheeppox virus (SPPV) whole-genome sequences (WGSs) were determined from samples collected during these outbreaks and analyzed in the context of all other published WGSs. Sheeppox virus strains can be divided in two, or possibly three, main groups. The isolates from the recent outbreaks belong to clade A2, which includes strains historically circulating in the Middle East and Northern Africa. Sequence divergence was low among the isolates that caused the recent European outbreaks. These results highlight the need for more regular and dense surveillance in under-sampled areas and the use of WGS to increase the chance of pinpointing the origin of an introduction, identifying potential introduction routes, and providing insights into SPPV evolution.

Indexed as

Disease OutbreaksGenome, ViralPhylogenyPoxviridae InfectionsSheep DiseasesAnimalsBulgariaCapripoxvirusGreeceSheepSpainWhole Genome Sequencing

Identifiers

PMID39476278
PMCPMC11525412

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.