Evidence map›Paper›PMID 39476224›Full record

ArticleThe Plant journal : for cell and molecular biology2024

Identifying the gene responsible for non-photochemical quenching reversal in Phaeodactylum tricornutum.

Maxwell A Ware, Andrew J Paton, Yu Bai, Tessema Kassaw, Martin Lohr, Graham Peers

Abstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Maxwell A WareDepartment of Biology, Colorado State University, Fort Collins, Colorado, 80523, USA.
Andrew J PatonDepartment of Biology, Colorado State University, Fort Collins, Colorado, 80523, USA.
Yu BaiDepartment of Biology, Colorado State University, Fort Collins, Colorado, 80523, USA.
Tessema KassawDepartment of Biology, Colorado State University, Fort Collins, Colorado, 80523, USA.
Martin LohrInstitut für Molekulare Physiologie, Johannes Gutenberg-University, Mainz, 55099, Germany.ORCID 0000-0002-4335-9887
Graham PeersDepartment of Biology, Colorado State University, Fort Collins, Colorado, 80523, USA.ORCID 0000-0002-3590-7820

Funding

Department of Energy, Biological and Environmental Research DE-SC0018344National Science Foundation Graduate Research Fellowship Program 006784
6 · The paper itself

Abstract

Algae such as diatoms and haptophytes have distinct photosynthetic pigments from plants, including a novel set of carotenoids. This includes a primary xanthophyll cycle comprised of diadinoxanthin and its de-epoxidation product diatoxanthin that enables the switch between light harvesting and non-photochemical quenching (NPQ)-mediated dissipation of light energy. The enzyme responsible for the reversal of this cycle was previously unknown. Here, we identified zeaxanthin epoxidase 3 (ZEP3) from Phaeodactylum tricornutum as the candidate diatoxanthin epoxidase. Knocking out the ZEP3 gene caused a loss of rapidly reversible NPQ following saturating light exposure. This correlated with the maintenance of high concentrations of diatoxanthin during recovery in low light. Xanthophyll cycling and NPQ relaxation were restored via complementation of the wild-type ZEP3 gene. The zep3 knockout strains showed reduced photosynthetic rates at higher light fluxes and reduced specific growth rate in variable light regimes, likely due to the mutant strains becoming locked in a light energy dissipation state. We were able to toggle the level of NPQ capacity in a time and dose dependent manner by placing the ZEP3 gene under the control of a β-estradiol inducible promoter. Identification of this gene provides a deeper understanding of the diversification of photosynthetic control in algae compared to plants and suggests a potential target to improve the productivity of industrial-scale cultures.

Indexed as

DiatomsPhotosynthesisXanthophyllsLightOxidoreductasesdiadinoxanthindiatoxanthinOxidoreductasesXanthophyllszeaxanthin epoxidasediadinoxanthindiatomdiatoxanthinnonphotochemical quenchingphotosynthesisxanthophyll cycle

Identifiers

PMID39476224
PMCPMC11629738

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.