Evidence map›Paper›PMID 39475277›Full record

ArticleJournal of virology2024

Electron tomography visualization of HIV-1 virions trapped by fusion inhibitors to host cells in infected tissues.

Mark S Ladinsky, Li Zhu, Irfan Ullah, Pradeep D Uchil, Priti Kumar, Michael S Kay, Pamela J Bjorkman

Abstract read
In one paragraph

Article in Journal of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Mark S LadinskyDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, California, USA.ORCID 0000-0002-1036-3513
Li ZhuSection of Infectious Diseases, Department of Internal Medicine, Yale School of Medicine, New Haven, Connecticut, USA.
Irfan UllahSection of Infectious Diseases, Department of Internal Medicine, Yale School of Medicine, New Haven, Connecticut, USA.
Pradeep D UchilDepartment of Microbial Pathogenesis, Yale School of Medicine, New Haven, Connecticut, USA.ORCID 0000-0002-7236-858X
Priti KumarSection of Infectious Diseases, Department of Internal Medicine, Yale School of Medicine, New Haven, Connecticut, USA.
Michael S KayDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, Utah, USA.
Pamela J BjorkmanDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, California, USA.ORCID 0000-0002-2277-3990

Funding

CHEETAH Center for the Structural Biology of HIV Infection, Restriction, and Viral DynamicsU54AI170856 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI JOSEPH D PUGLISI · 2022 to 2026
$34.4M
T cell-targeted lentiviral vectors with Cas9/RNP for the in vivo gene therapy of HIV-AIDSR01AI145164 · NIAID · YALE UNIVERSITY · PI KUMAR, PRITI · 2019 to 2024
$3.7M
Canadian Government | Canadian Institutes of Health Research (CIHR) 422148HHS | National Institutes of Health (NIH) R01AI145164NIAID NIH HHS R01 AI145164NIAID NIH HHS U54 AI170856
6 · The paper itself

Abstract

HIV-1 delivers its genetic material to infect a cell after fusion of the viral and host cell membranes, which takes place after the viral envelope (Env) binds host receptor and co-receptor proteins. Binding of host receptor CD4 to Env results in conformational changes that allow interaction with a host co-receptor (CCR5 or CXCR4). Further conformational rearrangements result in an elongated pre-hairpin intermediate structure in which Env is anchored to the viral membrane by its transmembrane region and to the host cell membrane by its fusion peptide. Although budding virions can be readily imaged by electron tomography (ET) of HIV-1-infected tissues and cultured cells, virions that are fusing (attached to host cells via pre-hairpin intermediates) are not normally visualized, perhaps because the process of membrane fusion is too fast to capture by ET. To image virions during fusion, we used fusion inhibitors to prevent downstream conformational changes in Env that lead to membrane fusion, thereby trapping HIV-1 virions linked to target cells by pre-hairpin intermediates. ET of HIV-1 pseudovirions bound to CD4

Indexed as

Electron Microscope TomographyHIV-1HIV InfectionsVirionVirus InternalizationAnimalsenv Gene Products, Human Immunodeficiency VirusHIV Fusion InhibitorsHumansMembrane FusionMiceenv Gene Products, Human Immunodeficiency VirusHIV Fusion Inhibitorselectron tomographyHIV-1 entryHIV-1 therapeutic

Identifiers

PMID39475277
PMCPMC11575291

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.