Evidence map›Paper›PMID 39475093›Full record

ArticleMolecular ecology2024

Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes.

Suvratha Jayaprasad, Valentina Peona, Simon J Ellerstrand, Roberto Rossini, Ignas Bunikis, Olga V Pettersson, Remi-André Olsen, Carl-Johan Rubin, Elisabet Einarsdottir, Franziska Bonath and 7 more

Abstract read
In one paragraph

Article in Molecular ecology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Suvratha JayaprasadPopulation Ecology Group, Institute of Ecology and Evolution, Friedrich Schiller University Jena, Jena, Germany.
Valentina PeonaDepartment of Organismal Biology-Systematic Biology, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.ORCID 0000-0001-5119-1837
Simon J EllerstrandDepartment of Biology, Lund University, Lund, Sweden.ORCID 0000-0003-2674-6997
Roberto RossiniDepartment of Organismal Biology-Systematic Biology, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.
Ignas BunikisDepartment of Immunology, Genetics and Pathology, Uppsala Genome Center, Uppsala University, National Genomics Infrastructure hosted by SciLifeLab, Uppsala, Sweden.
Olga V PetterssonDepartment of Immunology, Genetics and Pathology, Uppsala Genome Center, Uppsala University, National Genomics Infrastructure hosted by SciLifeLab, Uppsala, Sweden.ORCID 0000-0002-5597-1870
Remi-André OlsenDepartment of Biochemistry and Biophysics, Science for Life Laboratory, Stockholm University, Solna, Sweden.ORCID 0009-0002-8357-5186
Carl-Johan RubinDepartment of Medical Biochemistry and Microbiology - Disciplinary Domain of Medicine and Pharmacy, Faculty of Medicine, Uppsala University, Uppsala, Sweden.ORCID 0000-0001-8238-5052
Elisabet EinarsdottirDepartment of Gene Technology, Science for Life Laboratory, KTH-Royal Institute of Technology, Solna, Sweden.ORCID 0000-0003-3101-2285
Franziska BonathDepartment of Gene Technology, Science for Life Laboratory, KTH-Royal Institute of Technology, Solna, Sweden.
Tessa M BradfordEvolutionary Biology Unit, South Australian Museum, Adelaide, South Australia, Australia.ORCID 0000-0003-0607-1398
Steven J B CooperEvolutionary Biology Unit, South Australian Museum, Adelaide, South Australia, Australia.ORCID 0000-0002-7843-8438
Bengt HanssonDepartment of Biology, Lund University, Lund, Sweden.ORCID 0000-0001-6694-8169
Alexander SuhDepartment of Organismal Biology-Systematic Biology, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.ORCID 0000-0002-8979-9992
Takeshi KawakamiEmbark Veterinary, Inc., Boston, Massachusetts, USA.ORCID 0000-0002-9204-6852
Holger SchielzethPopulation Ecology Group, Institute of Ecology and Evolution, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0002-9124-2261
Octavio M Palacios-GimenezPopulation Ecology Group, Institute of Ecology and Evolution, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0002-1472-9949

Funding

Carl Tryggers Stiftelse för Vetenskaplig Forskning CTS 21:1389Marie Sklodowska Curie Actions, Co-fund Project INCA 600398Sven och Lilly Lawskis fund NA2018-0045Svenska Forskningsrådet Formas 2017-01597Swedish Research Council Vetenskapsrådet 2014-6325Swedish Research Council Vetenskapsrådet 2020-03866Swedish Research Council Vetenskapsrådet 2022-04996
6 · The paper itself

Abstract

The early evolution of sex chromosomes has remained obscure for more than a century. The Vandiemenella viatica species group of morabine grasshoppers is highly suited for studying the early stages of sex chromosome divergence and degeneration of the Y chromosome. This stems from the fact that neo-XY sex chromosomes have independently evolved multiple times by X-autosome fusions with different autosomes. Here, we generated new chromosome-level assemblies for two chromosomal races representing karyotypes with and without neo-sex chromosomes (P24XY and P24X0), and sequence data of a third chromosomal race with a different neo-XY chromosome system (P25XY). Interestingly, these two neo-XY chromosomal races are formed by different X-autosome fusions (involving chr1 and chrB, respectively), and we found that both neo-Y chromosomes have partly ceased to recombine with their neo-X counterpart. We show that the neo-XY chromosomes have diverged through accumulation of SNPs and structural mutations, and that many neo-Y-linked genes have degenerated since recombination ceased. However, the non-recombining regions of neo-Y chromosomes host non-degenerated genes crucial for sex determination, such as sex-lethal and transformer, alongside genes associated with spermatogenesis, fertility, and reproduction, illustrating their integrative role as a masculinizing supergene. Contrary to expectations, the neo-Y chromosomes showed (slightly) lower density of transposable elements (TEs) compared to other genomic regions. The study reveals the unique dynamics of young sex chromosomes, with evolution of recombination suppression and pronounced decay of (some) neo-sex chromosome genes, and provides a compelling case illustrating how chromosomal fusions and post-fusion mutational processes contribute to the evolution of supergenes.

Indexed as

Evolution, MolecularGrasshoppersRecombination, GeneticSex ChromosomesAnimalsChromosomes, InsectFemaleKaryotypeMalePolymorphism, Single NucleotideY Chromosomechromosomal rearrangementsgenetic degenerationgenomic recombinationneo‐sex chromosomesrepetitive DNAsexual antagonistic locussupergenes

Identifiers

PMID39475093
PMCPMC11589690

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.