Evidence map›Paper›PMID 39472907›Full record

ArticleParasites & vectors2024

Survey of sand fly fauna in six provinces of Southern Vietnam with species identification using DNA barcoding.

Trang Thuy Nguyen, Yudhi Ratna Nugraheni, Hoang Lan Anh Nguyen, Apinya Arnuphapprasert, Theerakamol Pengsakul, Le Quang Thong, Rinnara Ampol, Padet Siriyasatien, Morakot Kaewthamasorn

Abstract read
In one paragraph

Article in Parasites & vectors, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Trang Thuy NguyenThe International Graduate Program of Veterinary Science and Technology (VST), Faculty of Veterinary Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Yudhi Ratna NugraheniThe International Graduate Program of Veterinary Science and Technology (VST), Faculty of Veterinary Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Hoang Lan Anh NguyenThe International Graduate Program of Veterinary Science and Technology (VST), Faculty of Veterinary Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Apinya ArnuphapprasertFaculty of Veterinary Science, Rajamangala University of Technology Srivijaya, Nakhon Si Thammarat, 80240, Thailand.
Theerakamol PengsakulHealth and Environmental Research Center, Faculty of Environmental Management, Prince of Songkla University, Songkhla, 90110, Thailand.
Le Quang ThongFaculty of Animal Science and Veterinary Medicine, Nong Lam University, Ho Chi Minh City, Vietnam.
Rinnara AmpolDepartment of Parasitology, Faculty of Medicine, Chulalongkorn University, Bangkok, 10330, Thailand.
Padet SiriyasatienDepartment of Parasitology, Faculty of Medicine, Chulalongkorn University, Bangkok, 10330, Thailand.
Morakot KaewthamasornDepartment of Pathology, Faculty of Veterinary Science, Center of Excellence in Veterinary Parasitology, Chulalongkorn University, Bangkok, 10330, Thailand. Morakot.k@chula.ac.th.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSand flies, belonging to the Psychodidae family, represent small, hairy insects that serve as significant vectors in various important medical and veterinary diseases. Despite being recognized by the World Health Organization as an endemic area for leishmaniasis, Southeast Asia lacks comprehensive information on the species composition and biology of sand flies. To address this, the current study aimed to survey sand fly biodiversity.

methodsSand flies from six provinces in Southern Vietnam were collected using CDC light traps. Sand flies were subsequently identified morphologically and confirmed molecularly using mitochondrial cytochrome oxidase c subunit I (COI) and cytochrome b (cytb) sequences. BLASTN searches were conducted, and the species identity of sand flies was further confirmed through a Barcode of Life Database (BOLD) search utilizing COI sequences. Subsequently, nucleotide sequences were subjected to a panel of analyses including intraspecific variation, phylogenetic relationships and haplotype network. The average densities of collected sand flies (sand flies/trap/night) and species richness were also recorded.

resultsA total of 753 sand flies were collected. After excluding damaged specimens, six sand fly species, namely Phlebotomus stantoni, Sergentomyia khawi, Se. silvatica, Se. barraudi, Se. bailyi and Grassomyia indica, were identified. All conspecific sand fly sequences, including Ph. stantoni, Se. barraudi, Gr. indica, Se. bailyi, Se. khawi and Se. silvatica, clustered with their reference sequences, corroborating the results of morphology-based identification, BLASTN analysis and BOLD search. For intraspecific variation of sand flies obtained from the current study, COI diversity indices were consistently higher than those of cytb.

conclusionsThis study provides the first updates on morphological and molecular characterization of sand flies in Southern Vietnam. This acquired knowledge on sand fly species composition is essential for controlling sand fly-borne diseases in this potentially endemic region.

Indexed as

BiodiversityDNA Barcoding, TaxonomicPhylogenyPsychodidaeAnimalsCytochromes bElectron Transport Complex IVFemaleGenetic VariationHaplotypesInsect VectorsVietnamCytochromes bElectron Transport Complex IVCytochrome c oxidase subunit 1Mitochondrial cytochrome bPCRSand fliesSouthern Vietnam

Identifiers

PMID39472907
PMCPMC11523761

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.