Evidence map›Paper›PMID 39472895›Full record

ArticleRespiratory research2024

Automatic lung cancer subtyping using rapid on-site evaluation slides and serum biological markers.

Junxiang Chen, Chunxi Zhang, Jun Xie, Xuebin Zheng, Pengchen Gu, Shuaiyang Liu, Yongzheng Zhou, Jie Wu, Ying Chen, Yanli Wang and 2 more

Abstract read
In one paragraph

Article in Respiratory research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Junxiang Chen *Department of Respiratory Endoscopy, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Chunxi Zhang *Department of Respiratory Endoscopy, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Jun XieShanghai Aitrox Technology Corporation Limited, Shanghai, China.
Xuebin ZhengShanghai Aitrox Technology Corporation Limited, Shanghai, China.
Pengchen GuShanghai Aitrox Technology Corporation Limited, Shanghai, China.
Shuaiyang LiuDepartment of Respiratory Endoscopy, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Yongzheng ZhouDepartment of Respiratory Endoscopy, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Jie WuDepartment of Pathology, Jiahui International Hospital, Shanghai, China.
Ying ChenDepartment of Pathology, Fudan University Shanghai Cancer Center, Shanghai, China.
Yanli WangDepartment of Pathology, Fudan University Shanghai Cancer Center, Shanghai, China.
Chuan HeShanghai Aitrox Technology Corporation Limited, Shanghai, China.
Jiayuan SunDepartment of Respiratory Endoscopy, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China. xkyyjysun@163.com.

Funding

Joint Clinical Research Center of Institute of Medical Robotics-Chest Hospital, Shanghai Jiao Tong University IMR-XKH202102National Multidisciplinary Treatment Project for Major Diseases 2020NMDTPScience and Technology Commission of Shanghai Municipality 21XD1434400SJTU Trans-med Awards Research 20210101
6 · The paper itself

Abstract

backgroundRapid on-site evaluation (ROSE) plays an important role during transbronchial sampling, providing an intraoperative cytopathologic evaluation. However, the shortage of cytopathologists limits its wide application. This study aims to develop a deep learning model to automatically analyze ROSE cytological images.

methodsThe hierarchical multi-label lung cancer subtyping (HMLCS) model that combines whole slide images of ROSE slides and serum biological markers was proposed to discriminate between benign and malignant lesions and recognize different subtypes of lung cancer. A dataset of 811 ROSE slides and paired serum biological markers was retrospectively collected between July 2019 and November 2020, and randomly divided to train, validate, and test the HMLCS model. The area under the curve (AUC) and accuracy were calculated to assess the performance of the model, and Cohen's kappa (κ) was calculated to measure the agreement between the model and the annotation. The HMLCS model was also compared with professional staff.

resultsThe HMLCS model achieved AUC values of 0.9540 (95% confidence interval [CI]: 0.9257-0.9823) in malignant/benign classification, 0.9126 (95% CI: 0.8756-0.9365) in malignancy subtyping (non-small cell lung cancer [NSCLC], small cell lung cancer [SCLC], or other malignancies), and 0.9297 (95% CI: 0.9026-0.9603) in NSCLC subtyping (lung adenocarcinoma [LUAD], lung squamous cell carcinoma [LUSC], or NSCLC not otherwise specified [NSCLC-NOS]), respectively. In total, the model achieved an AUC of 0.8721 (95% CI: 0.7714-0.9258) and an accuracy of 0.7184 in the six-class classification task (benign, LUAD, LUSC, NSCLC-NOS, SCLC, or other malignancies). In addition, the model demonstrated a κ value of 0.6183 with the annotation, which was comparable to cytopathologists and superior to trained bronchoscopists and technicians.

conclusionThe HMLCS model showed promising performance in the multiclassification of lung lesions or intrathoracic lymphadenopathy, with potential application to provide real-time feedback regarding preliminary diagnoses of specimens during transbronchial sampling procedures. CLINICAL TRIAL NUMBER: Not applicable.

Indexed as

Biomarkers, TumorLung NeoplasmsAgedDeep LearningFemaleHumansMaleMiddle AgedRetrospective StudiesBiomarkers, TumorDeep learningLung cancerRapid on-site evaluationSerum biological markersSubtyping

Identifiers

PMID39472895
PMCPMC11523640

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.