Evidence map›Paper›PMID 39472488›Full record

ArticleCommunications biology2024

Eustigmatophyte model of red-shifted chlorophyll a absorption in light-harvesting complexes.

Alessandro Agostini, David Bína, Dovilė Barcytė, Marco Bortolus, Marek Eliáš, Donatella Carbonera, Radek Litvín

Abstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Far-Red Absorbing LHCII Incorporating ChlorophyllThe journal of physical chemistry letters · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alessandro AgostiniDepartment of Chemical Sciences, University of Padova, via Marzolo 1, 35131, Padova, Italy. alessandro.agostini.1@unipd.it.ORCID 0000-0002-8877-315X
David BínaCzech Academy of Sciences, Biology Centre, Institute of Plant Molecular Biology, Branišovská 31, 370 05, České Budějovice, Czech Republic.ORCID 0000-0002-9259-4218
Dovilė BarcytėDepartment of Biology and Ecology, Faculty of Science, University of Ostrava, Chittussiho 10, 710 00, Ostrava, Czech Republic.ORCID 0000-0002-3542-1177
Marco BortolusDepartment of Chemical Sciences, University of Padova, via Marzolo 1, 35131, Padova, Italy.ORCID 0000-0002-6033-6521
Marek EliášDepartment of Biology and Ecology, Faculty of Science, University of Ostrava, Chittussiho 10, 710 00, Ostrava, Czech Republic.ORCID 0000-0003-0066-6542
Donatella CarboneraDepartment of Chemical Sciences, University of Padova, via Marzolo 1, 35131, Padova, Italy.ORCID 0000-0002-5499-1140
Radek LitvínCzech Academy of Sciences, Biology Centre, Institute of Plant Molecular Biology, Branišovská 31, 370 05, České Budějovice, Czech Republic. rlitvin@prf.jcu.cz.ORCID 0000-0001-5272-9029

Funding

Università degli Studi di Padova (University of Padova) P-DiSC#02BIRD2020-UNIPD
6 · The paper itself

Abstract

Photosynthetic organisms harvest light for energy. Some eukaryotic algae have specialized in harvesting far-red light by tuning chlorophyll a absorption through a mechanism still to be elucidated. Here, we combined optically detected magnetic resonance and pulsed electron paramagnetic resonance measurements on red-adapted light-harvesting complexes, rVCP, isolated from the freshwater eustigmatophyte alga Trachydiscus minutus to identify the location of the pigments responsible for this remarkable adaptation. The pigments have been found to belong to an excitonic cluster of chlorophylls a at the core of the complex, close to the central carotenoids in L1/L2 sites. A pair of structural features of the Chl a403/a603 binding site, namely the histidine-to-asparagine substitution in the magnesium-ligation residue and the small size of the amino acid at the i-4 position, resulting in a [A/G]xxxN motif, are proposed to be the origin of this trait. Phylogenetic analysis of various eukaryotic red antennae identified several potential LHCs that could share this tuning mechanism. This knowledge of the red light acclimation mechanism in algae is a step towards rational design of algal strains in order to enhance light capture and efficiency in large-scale biotechnology applications.

Indexed as

Chlorophyll ALight-Harvesting Protein ComplexesChlorophyllElectron Spin Resonance SpectroscopyLightPhylogenyChlorophyllChlorophyll ALight-Harvesting Protein Complexes

Identifiers

PMID39472488
PMCPMC11522437

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.