Evidence map›Paper›PMID 39472332›Full record

ArticleMikrochimica acta2024

Nanoplasmonic microarray-based solid-phase amplification for highly sensitive and multiplexed molecular diagnostics: application for detecting SARS-CoV-2.

Ji Young Lee, Hyowon Jang, Sunjoo Kim, Taejoon Kang, Sung-Gyu Park, Min-Young Lee

Abstract read
In one paragraph

Article in Mikrochimica acta, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Simultaneous and sensitive detection ofFrontiers in bioengineering and biotechnology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ji Young LeeAdvanced Bio and Healthcare Materials Research Division, Korea Institute of Materials Science (KIMS), 797, Changwon-Daero, Seongsan-Gu, Changwon-Si, Gyeongsangnam-Do, 51508, Republic of Korea.
Hyowon JangBionanotechnology Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125, Gwahak-Ro, Yuseong-Gu, Daejeon, 34141, Republic of Korea.
Sunjoo KimDepartment of Laboratory Medicine, Gyeongsang National University College of Medicine, 79 Gangnam-Ro, Jinju, Gyeongsangnam-Do, 52727, Republic of Korea.
Taejoon KangBionanotechnology Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125, Gwahak-Ro, Yuseong-Gu, Daejeon, 34141, Republic of Korea.
Sung-Gyu ParkAdvanced Bio and Healthcare Materials Research Division, Korea Institute of Materials Science (KIMS), 797, Changwon-Daero, Seongsan-Gu, Changwon-Si, Gyeongsangnam-Do, 51508, Republic of Korea. sgpark@kims.re.kr.
Min-Young LeeAdvanced Bio and Healthcare Materials Research Division, Korea Institute of Materials Science (KIMS), 797, Changwon-Daero, Seongsan-Gu, Changwon-Si, Gyeongsangnam-Do, 51508, Republic of Korea. myay0615@kims.re.kr.

Funding

Korea Institute of Materials Science (KIMS) PNK9350Korea Research Institute of Bioscience and Biotechnology KGM5472413Ministry of Trade, Industry and Energy RS-2024-00432382National R&D Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Science and ICT NRF-2021M3H4A1A02051036
6 · The paper itself

Abstract

A novel approach is introduced using nanoplasmonic microarray-based solid-phase recombinase polymerase amplification (RPA) that offers high sensitivity and multiplexing capabilities for gene detection. Nanoplasmonic microarrays were developed through one-step immobilization of streptavidin/biotin primers and fine-tuning the amplicon size to achieve high plasmon-enhanced fluorescence (PEF) on the nanoplasmonic substrate, thereby improving sensitivity. The specificity and sensitivity of solid-phase RPA on nanoplasmonic microarrays was evaluated in detecting E, N, and RdRP genes of SARS-CoV-2. High specificity was achieved by minimizing primer-dimer formation and employing a stringent washing process and high sensitivity obtained with a limit of detection of four copies per reaction within 30 min. In clinical testing with nasopharyngeal swab samples (n = 30), the nanoplasmonic microarrays demonstrated a 100% consistency with the PCR results for detecting SARS-CoV-2, including differentiation of Omicron mutations BA.1 and BA.2. This approach overcomes the sensitivity issue of solid-phase amplification, as well as offers rapidity, high multiplexing capabilities, and simplified equipment by using isothermal reaction, making it a valuable tool for on-site molecular diagnostics.

Indexed as

COVID-19SARS-CoV-2HumansLimit of DetectionNucleic Acid Amplification TechniquesSensitivity and SpecificityDifferentiation of mutationsMultiplex molecular diagnosticsNanoplasmonic microarraysSARS-CoV-2Solid-phase amplification

Identifiers

PMID39472332
PMCPMC11522150

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.