Evidence map›Paper›PMID 39471804›Full record

ArticleAmerican journal of human genetics2024

Homozygous variants in WDR83OS lead to a neurodevelopmental disorder with hypercholanemia.

Scott Barish, Sheng-Jia Lin, Reza Maroofian, Alper Gezdirici, Hamoud Alhebby, Aurélien Trimouille, Marta Biderman Waberski, Tadahiro Mitani, Ilka Huber, Kristian Tveten and 25 more

Abstract read
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Article in American journal of human genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors.

Scott BarishDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Sheng-Jia LinGenes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.
Reza MaroofianDepartment of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, London WC1N 3BG, UK.
Alper GezdiriciDepartment of Medical Genetics, Basaksehir Cam and Sakura City Hospital, Istanbul 34480, Turkey.
Hamoud AlhebbyDivision of Gastroenterology, Department of Pediatrics, Prince Sultan Military Medical City, Riyadh, Saudi Arabia.
Aurélien TrimouilleDepartment of Medical Genetics, University Hospital of Bordeaux, 33076 Bordeaux, France; INSERM U1211, Laboratoire Maladies Rares: Génétique et Métabolisme, Bordeaux University, Bordeaux, France.
Marta Biderman WaberskiInova Health System, Falls Church, VA, USA.
Tadahiro MitaniDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Ilka HuberDepartment of Pediatrics, Sørlandet Hospital, Arendal, Norway.
Kristian TvetenDepartment of Medical Genetics, Telemark Hospital Trust, Skien, Norway.
Øystein L HollaDepartment of Medical Genetics, Telemark Hospital Trust, Skien, Norway.
Øyvind L BuskDepartment of Medical Genetics, Telemark Hospital Trust, Skien, Norway.
Henry HouldenDepartment of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, London WC1N 3BG, UK.
Ehsan Ghayoor KarimianiMolecular and Clinical Sciences Institute, St. George's, University of London, Cranmer Terrace, London SW17 0RE, UK.
Mehran Beiraghi ToosiDepartment of Pediatric Diseases, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran; Neuroscience Research Center, Mashhad University of Medical Sciences, Mashhad, Iran.
Reza Shervin BadvChildren's Medical Center, Pediatrics Center of Excellence, Tehran University of Medical Sciences, Tehran, Iran.
Paria Najarzadeh TorbatiDepartment of Medical Genetics, Next Generation Genetic Polyclinic, Mashhad, Iran.
Fatemeh EghbalDepartment of Medical Genetics, Next Generation Genetic Polyclinic, Mashhad, Iran.
Javad AkhondianNeuroscience Research Center, Mashhad University of Medical Sciences, Mashhad, Iran.
Ayat Al SafarCollege of Medicine, Imam Abdulrahman bin Faisal University, Dammam, Saudi Arabia; Department of Paediatrics, King Fahd Hospital of University, Al-khobar, Saudi Arabia.
Abdulrahman AlswaidKing Saud Bin Abdulaziz University for Health Sciences, Department of Pediatrics, MC 1940, King Abdullah Specialized Children's Hospital, Riyadh, Saudi Arabia.
Giovanni ZifarelliCENTOGENE GmbH, Am Strande 7, 18055 Rostock, Germany.
Peter BauerCENTOGENE GmbH, Am Strande 7, 18055 Rostock, Germany.
Dana MarafiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Department of Pediatrics, Faculty of Medicine, Kuwait University, P.O. Box 24923, Safat 13110, Kuwait.
Jawid M FatihDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Kevin HuangGenes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.
Cassidy PetreeGenes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.
Daniel G CalameDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Section of Neurology and Developmental Neuroscience, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA; Texas Children's Hospital, Houston, TX 77030, USA.
Charlotte von der LippeDepartment of Medical Genetics, Telemark Hospital Trust, Skien, Norway.
Fowzan S AlkurayaDepartment of Translational Genomics, Center for Genomic Medicine, King Faisal Specialist Hospital and Research Centre, Riyadh, Saudi Arabia.
Sami WaliDivision of Gastroenterology, Department of Pediatrics, Prince Sultan Military Medical City, Riyadh, Saudi Arabia.
James R LupskiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Texas Children's Hospital, Houston, TX 77030, USA; The Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA; Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA.
Gaurav K VarshneyGenes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.
Jennifer E PoseyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: jennifer.posey@bcm.edu.
Davut PehlivanDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Section of Neurology and Developmental Neuroscience, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA; Texas Children's Hospital, Houston, TX 77030, USA. Electronic address: pehlivan@bcm.edu.

Funding

Baylor-Johns Hopkins Center for Mendelian GeneticsUM1HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2016 to 2020
$14.5M
Frequency of variants of unknown significance by ancestry groups in the All of Us Research Program cohortU01HG011758 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI RICHARD A GIBBS, JAMES R. LUPSKI · 2021 to 2026
$13.8M
MEDICAL GENETICS RESEARCH FELLOWSHIP PROGRAMT32GM007526 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI Brendan Lee · 1985 to 2026
$11.4M
STRUCTURAL VARIATION IN NEUROLOGICAL DISEASER35NS105078 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI LUPSKI, JAMES R. · 2018 to 2025
$6.0M
Development of scalable methods for rapid phenotyping and functional testing of variantsR24OD034438 · OD · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI Gaurav K Varshney · 2024 to 2026
$1.8M
Comprehensive Deep Phenotyping and Multi-omics to Develop Clinical and Molecular Biomarkers for MeCP2-related DiseasesK23NS125126 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI Davut Pehlivan · 2022 to 2026
$1.1M
Individual genomic analyses to discover the molecular basis and mechanisms contributing to adult-onset diseaseK08HG008986 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI POSEY, JENNIFER ELLEN · 2017 to 2021
$831k
NHGRI NIH HHS K08 HG008986NHGRI NIH HHS UM1 HG006542NIGMS NIH HHS T32 GM007526NIH HHS R24 OD034438NINDS NIH HHS K23 NS125126NINDS NIH HHS R35 NS105078
6 · The paper itself

Abstract

WD repeat domain 83 opposite strand (WDR83OS) encodes the 106-aa (amino acid) protein Asterix, which heterodimerizes with CCDC47 to form the PAT (protein associated with ER translocon) complex. This complex functions as a chaperone for large proteins containing transmembrane domains to ensure proper folding. Until recently, little was known about the role of WDR83OS or CCDC47 in human disease traits. However, biallelic variants in CCDC47 were identified in four unrelated families with trichohepatoneurodevelopmental syndrome, characterized by a neurodevelopmental disorder (NDD) with liver dysfunction. Three affected siblings in an additional family share a homozygous truncating WDR83OS variant and a phenotype of NDD, dysmorphic features, and liver dysfunction. Using family-based rare variant analyses of exome sequencing (ES) data and case matching through GeneMatcher, we describe the clinical phenotypes of 11 additional individuals in eight unrelated families (nine unrelated families, 14 individuals in total) with biallelic putative truncating variants in WDR83OS. Consistent clinical features include NDD (14/14), facial dysmorphism (13/14), intractable itching (9/14), and elevated bile acids (5/6). Whereas bile acids were significantly elevated in 5/6 of individuals tested, bilirubin was normal and liver enzymes were normal to mildly elevated in all 14 individuals. In three of six individuals for whom longitudinal data were available, we observed a progressive reduction in relative head circumference. A zebrafish model lacking Wdr83os function further supports its role in the nervous system, craniofacial development, and lipid absorption. Taken together, our data support a disease-gene association between biallelic loss-of-function of WDR83OS and a neurological disease trait with hypercholanemia.

Indexed as

HomozygoteNeurodevelopmental DisordersZebrafishAdolescentAdultAnimalsBile Acids and SaltsChildChild, PreschoolExome SequencingFemaleHumansInfantMaleMutationPedigreeBile Acids and SaltsASTERIXCCDC47developmental delayER translocationhypercholanemiaintellectual disabilityPAT complexpruritusWDR83OS

Identifiers

PMID39471804
PMCPMC11568760

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.