Evidence map›Paper›PMID 39471431›Full record

ArticleBlood advances2024

Epigenetic features support the diagnosis of B-cell prolymphocytic leukemia and identify 2 clinicobiological subtypes.

Stella Charalampopoulou, Elise Chapiro, Ferran Nadeu, Thorsten Zenz, Sílvia Beà, Ares Martínez-Farran, Marta Aymerich, Maria Rozman, Damien Roos-Weil, Olivier Bernard and 10 more

Abstract read
In one paragraph

Article in Blood advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Stella CharalampopoulouInstitut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain.ORCID 0000-0003-0956-231X
Elise ChapiroService d'Hématologie Biologique, Hôpital Pitié-Salpêtrière, Sorbonne Université, Assistance Publique-Hôpitaux de Paris, Paris, France.ORCID 0000-0003-3427-7596
Ferran NadeuInstitut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain.ORCID 0000-0003-2910-9440
Thorsten ZenzDepartment of Medical Oncology and Hematology, University Hospital and University of Zürich, Zurich, Switzerland.ORCID 0000-0001-7890-9845
Sílvia BeàInstitut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain.ORCID 0000-0001-7192-2385
Ares Martínez-FarranInstitut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain.
Marta AymerichPathology Department, Hematopathology Section, Hospital Clínic de Barcelona, Barcelona, Spain.ORCID 0000-0001-6263-1682
Maria RozmanPathology Department, Hematopathology Section, Hospital Clínic de Barcelona, Barcelona, Spain.ORCID 0000-0002-2641-1110
Damien Roos-WeilService d'Hématologie Biologique, Hôpital Pitié-Salpêtrière, Sorbonne Université, Assistance Publique-Hôpitaux de Paris, Paris, France.ORCID 0000-0002-7767-755X
Olivier BernardGustave Roussy, INSERN U1170, Villejuif, France.
Santos A SusinCentre de Recherche des Cordeliers, Sorbonne Université, Université Paris Cité, INSERM UMRS 1138, Drug Resistance in Hematological Malignancies Team, Paris, France.ORCID 0000-0002-3366-1628
Helen ParkerCancer Genomics, School of Cancer Sciences, Faculty of Medicine, University of Southampton, Southampton, United Kingdom.ORCID 0000-0001-8308-9781
Renata WalewskaDepartment of Molecular Pathology, University Hospitals Dorset, Bournemouth, United Kingdom.
Christopher C OakesDivision of Hematology, The Ohio State University, Columbus, OH.
Jonathan C StreffordCancer Genomics, School of Cancer Sciences, Faculty of Medicine, University of Southampton, Southampton, United Kingdom.ORCID 0000-0002-0972-2881
Elías CampoInstitut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain.ORCID 0000-0001-9850-9793
Estela MatutesPathology Department, Hematopathology Section, Hospital Clínic de Barcelona, Barcelona, Spain.
Martí Duran-FerrerInstitut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain.ORCID 0000-0003-1666-5819
Florence Nguyen-KhacService d'Hématologie Biologique, Hôpital Pitié-Salpêtrière, Sorbonne Université, Assistance Publique-Hôpitaux de Paris, Paris, France.ORCID 0000-0003-3107-6668
José I Martín-SuberoInstitut d'Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain.ORCID 0000-0001-8809-5195

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

abstractThe recognition of B-cell prolymphocytic leukemia (B-PLL) as a separate entity is controversial based on the current classification systems. Here, we analyzed the DNA methylome of a cohort of 20 B-PLL cases diagnosed according to the guidelines of the International Consensus Classification/Fourth revised edition of the World Health Organization Classification, and compared them with chronic lymphocytic leukemia (CLL), mantle cell lymphoma (MCL), splenic marginal zone lymphoma (SMZL), and normal B-cell subpopulations. Unsupervised principal component analyses suggest that B-PLL is epigenetically distinct from CLL, MCL, and SMZL, which is further supported by robust differential methylation signatures in B-PLL. We also observe that B-PLL can be segregated into 2 epitypes with differential clinicobiological characteristics. B-PLL epitype 1 carries lower immunoglobulin heavy variable somatic hypermutation and a less profound germinal center-related DNA methylation imprint than epitype 2. Furthermore, epitype 1 is significantly enriched in mutations affecting MYC and SF3B1, and displays DNA hypomethylation and gene upregulation signatures enriched in MYC targets. Despite the low sample size, patients from epitype 1 have an inferior overall survival than those of epitype 2. This study provides relevant insights into the biology and differential diagnosis of B-PLL, and potentially identifies 2 subgroups with distinct biological and clinical features.

Indexed as

DNA MethylationEpigenesis, GeneticLeukemia, Prolymphocytic, B-CellAgedFemaleHumansLeukemia, Lymphocytic, Chronic, B-CellLymphoma, Mantle-CellMale

Identifiers

PMID39471431
PMCPMC11700275

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.