Evidence map›Paper›PMID 39471201›Full record

ArticlePloS one2024

Utilizing SSR-based core collection development to improve conservation and utilization of Corylus L. genetic resources.

Weicong Yang, Boning Yang, Liyuan Lu, Xuemei Zhang, Jun Sun, Liwei Wang, Zeyang Zheng, Dejun Liang, Kehan Wang, Xinyu Yan and 2 more

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Weicong YangLiaoning Institute of Economic Forestry, Dalian, Liaoning Province, China.
Boning YangForestry College of Southwest Forestry University, Kunming, Yunnan Province, China.
Liyuan LuLiaoning Institute of Economic Forestry, Dalian, Liaoning Province, China.
Xuemei ZhangLiaoning Institute of Economic Forestry, Dalian, Liaoning Province, China.
Jun SunLiaoning Institute of Economic Forestry, Dalian, Liaoning Province, China.
Liwei WangLiaoning Institute of Economic Forestry, Dalian, Liaoning Province, China.
Zeyang ZhengLiaoning Institute of Economic Forestry, Dalian, Liaoning Province, China.
Dejun LiangLiaoning Institute of Economic Forestry, Dalian, Liaoning Province, China.
Kehan WangLiaoning Institute of Economic Forestry, Dalian, Liaoning Province, China.
Xinyu YanLiaoning Institute of Economic Forestry, Dalian, Liaoning Province, China.
Chenchen YangLinghai Forestry & Grassland Protection Centre, Jinzhou, Liaoning Province, China.
Zhenpan LiuLiaoning Institute of Economic Forestry, Dalian, Liaoning Province, China.ORCID 0009-0004-1464-5341

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hazelnuts are traditional woody oilseed plants. Corylus L. resources are rich in variety and widely distributed in China. However, the identification of germplasm varieties and the selection of superior varieties remain quite limited. This study aimed to analyze the genetic diversity of 331 Corylus L. germplasms using 16 simple sequence repeat (SSR) markers. Based on this, 11 pairs of core primers were selected, a fingerprint database of germplasm resources was constructed, and a primary core collection was screened. The results indicated that these tested Corylus L. germplasms exhibited a high level of genetic diversity, with an average number of alleles (Na) per locus of 14.5 and a polymorphic information content of 0.777. The phylogenetic relationships among various hazelnut cultivars were characterized by complexity, and they were delineated into four distinct groups facilitated by genetic distance analyses. An SSR fingerprint database for 331 Corylus L. germplasms was successfully constructed using the 11 obtained core SSR markers to increase the discrimination efficiency. Ultimately, 127 primary core accessions of Corylus L. were selected. The retention rate for the observed Na and MAF (the minor allele frequency) in the primary core germplasm constructed based on a sampling proportion of 38.36% was 100% and 94.7%, respectively. Shannon's information index (I) was highly consistent between the core and original germplasms, indicating that the core germplasm could fully represent the genetic diversity of the original germplasm. Additionally, the principal coordinate analysis of the selected primary core germplasm was essentially consistent with that of the entire original germplasm, further supporting the broad representativeness of the core germplasm. This study provided a basis for precisely identifying and efficiently utilizing Corylus L. accession.

Indexed as

CorylusMicrosatellite RepeatsPhylogenyChinaConservation of Natural ResourcesGenetic MarkersGenetic VariationPolymorphism, GeneticGenetic Markers

Identifiers

PMID39471201
PMCPMC11521296

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.