Evidence map›Paper›PMID 39470431›Full record

ArticleRadiology2024

Comparing Commercial and Open-Source Large Language Models for Labeling Chest Radiograph Reports.

Felix J Dorfner, Liv Jürgensen, Leonhard Donle, Fares Al Mohamad, Tobias R Bodenmann, Mason C Cleveland, Felix Busch, Lisa C Adams, James Sato, Thomas Schultz and 4 more

Abstract readComparative Study
In one paragraph

Article in Radiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Observational
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  6. Review
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  11. RadAnnotate: Large Language Models for Efficient and Reliable Radiology Report Annotation.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2026
    Article
  12. Article
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  15. Review
4 · The record

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5 · Who and what money

Authors and funding

14 authors.

Felix J DorfnerFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).ORCID 0009-0003-5914-3233
Liv JürgensenFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).ORCID 0009-0004-0710-6403
Leonhard DonleFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).ORCID 0000-0002-7931-4621
Fares Al MohamadFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).ORCID 0009-0001-7616-3629
Tobias R BodenmannFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).
Mason C ClevelandFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).ORCID 0009-0003-4472-043X
Felix BuschFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).ORCID 0000-0001-9770-8555
Lisa C AdamsFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).ORCID 0000-0001-5836-4542
James SatoFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).
Thomas SchultzFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).
Albert E KimFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).
Jameson MerkowFrom the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).
Keno K Bressem *From the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).ORCID 0000-0001-9249-8624
Christopher P Bridge *From the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, 149 Thirteenth St, Charlestown, MA 02129 (F.J.D., T.R.B., M.C.C., A.E.K., C.P.B.); Department of Radiology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany (F.J.D., L.D., F.A.M., F.B., L.J.); Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Mass (L.J.); Department of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany (L.C.A.); Mass General Brigham Data Science Office, Boston, Mass (J.S., T.S., C.P.B.); Microsoft Health and Life Sciences (HLS), Redmond, Wash (J.M.); Klinikum rechts der Isar, Technical University of Munich, Munich, Germany (K.K.B.); Department of Radiology and Nuclear Medicine, German Heart Center Munich, Munich, Germany (K.K.B.); and Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, School of Medicine and Health, German Heart Center, TUM University Hospital, Munich, Germany (K.K.B.).ORCID 0000-0002-2242-351X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background Rapid advances in large language models (LLMs) have led to the development of numerous commercial and open-source models. While recent publications have explored OpenAI's GPT-4 to extract information of interest from radiology reports, there has not been a real-world comparison of GPT-4 to leading open-source models. Purpose To compare different leading open-source LLMs to GPT-4 on the task of extracting relevant findings from chest radiograph reports. Materials and Methods Two independent datasets of free-text radiology reports from chest radiograph examinations were used in this retrospective study performed between February 2, 2024, and February 14, 2024. The first dataset consisted of reports from the ImaGenome dataset, providing reference standard annotations from the MIMIC-CXR database acquired between 2011 and 2016. The second dataset consisted of randomly selected reports created at the Massachusetts General Hospital between July 2019 and July 2021. In both datasets, the commercial models GPT-3.5 Turbo and GPT-4 were compared with open-source models that included Mistral-7B and Mixtral-8 × 7B (Mistral AI), Llama 2-13B and Llama 2-70B (Meta), and Qwen1.5-72B (Alibaba Group), as well as CheXbert and CheXpert-labeler (Stanford ML Group), in their ability to accurately label the presence of multiple findings in radiograph text reports using zero-shot and few-shot prompting. The McNemar test was used to compare F1 scores between models. Results On the ImaGenome dataset (

Indexed as

Radiography, ThoracicHumansNatural Language ProcessingRetrospective Studies

Identifiers

PMID39470431
PMCPMC11535875

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