Evidence map›Paper›PMID 39470214›Full record

ArticleApplied and environmental microbiology2024

Cyanobacteria newly isolated from marine volcanic seeps display rapid sinking and robust, high-density growth.

Max G Schubert, Tzu-Chieh Tang, Isabella M Goodchild-Michelman, Krista A Ryon, James R Henriksen, Theodore Chavkin, Yanqi Wu, Teemu P Miettinen, Stefanie Van Wychen, Lukas R Dahlin and 12 more

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Max G SchubertTwo Frontiers Project, Fort Collins, Colorado, USA.ORCID 0000-0001-5047-2207
Tzu-Chieh TangWyss Institute of Biologically-Inspired Engineering, Boston, Massachusetts, USA.
Isabella M Goodchild-MichelmanWyss Institute of Biologically-Inspired Engineering, Boston, Massachusetts, USA.
Krista A RyonTwo Frontiers Project, Fort Collins, Colorado, USA.
James R HenriksenTwo Frontiers Project, Fort Collins, Colorado, USA.
Theodore ChavkinTwo Frontiers Project, Fort Collins, Colorado, USA.
Yanqi WuKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Teemu P MiettinenKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Stefanie Van WychenRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA.
Lukas R DahlinBiosciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA.
Davide SpataforaTwo Frontiers Project, Fort Collins, Colorado, USA.
Gabriele TurcoTwo Frontiers Project, Fort Collins, Colorado, USA.
Michael T GuarnieriBiosciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA.
Scott R ManalisKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
John KowitzTwo Frontiers Project, Fort Collins, Colorado, USA.
Elizabeth C HannWyss Institute of Biologically-Inspired Engineering, Boston, Massachusetts, USA.
Raja DhirTwo Frontiers Project, Fort Collins, Colorado, USA.
Paola QuatriniTwo Frontiers Project, Fort Collins, Colorado, USA.
Christopher E MasonTwo Frontiers Project, Fort Collins, Colorado, USA.ORCID 0000-0002-1850-1642
George M ChurchTwo Frontiers Project, Fort Collins, Colorado, USA.
Marco MilazzoTwo Frontiers Project, Fort Collins, Colorado, USA.ORCID 0000-0002-2202-0542
Braden T TierneyTwo Frontiers Project, Fort Collins, Colorado, USA.ORCID 0000-0002-7533-8802

Funding

National Science Foundation (NSF) MCB-2037995US Department of Energy (DOE) DE-FG02-02ER63445
6 · The paper itself

Abstract

Cyanobacteria are photosynthetic organisms that play important roles in carbon cycling and are promising bioproduction chassis. Here, we isolate two novel cyanobacteria with 4.6Mbp genomes, UTEX 3221 and UTEX 3222, from a unique marine environment with naturally elevated CO₂. We describe complete genome sequences for both isolates and, focusing on UTEX 3222 due to its planktonic growth in liquid, characterize biotechnologically relevant growth and biomass characteristics. UTEX 3222 outpaces other fast-growing model strains on a solid medium. It can double every 2.35 hours in a liquid medium and grows to high density (>31 g/L biomass dry weight) in batch culture, nearly double that of IMPORTANCE: Cyanobacteria provide a potential avenue for both biomanufacturing and combatting climate change via high-efficiency photosynthetic carbon sequestration. This study identifies novel photosynthetic organisms isolated from a unique geochemical environment and describes their genomes, growth behavior in culture, and biochemical composition. These cyanobacteria appear to make a tractable research model, and cultures are made publicly available alongside information about their culture and maintenance. Application of these organisms to carbon sequestration and/or biomanufacturing is discussed, including unusual, rapid settling characteristics of the strains relevant to scaled culture.

Indexed as

Carbon DioxideCyanobacteriaSeawaterBiomassGenome, BacterialPhotosynthesisSynechococcusCarbon Dioxidealgaecarbon sequestrationCO2cyanobacteriamicrobial diversitymicrobiologyphotosynthesis

Identifiers

PMID39470214
PMCPMC11577773

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.