Evidence map›Paper›PMID 39468445›Full record

ArticleBMC infectious diseases2024

Blood microbiota in HIV-infected and HIV-uninfected patients with suspected sepsis detected by metagenomic next-generation sequencing.

Qianhui Chen, Zhong Chen, Yuting Tan, Songjie Wu, Shi Zou, Jie Liu, Shihui Song, Qian Du, Min Wang, Ke Liang

Abstract read
In one paragraph

Article in BMC infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Qianhui Chen *Department of Infectious Diseases, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, China.
Zhong Chen *Department of Infection and Immunology, The First Hospital of Changsha City, 410000, Hengyang, Hunan, China.
Yuting Tan *Department of Infectious Diseases, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, China.
Songjie WuWuhan Research Center for Infectious Diseases and Cancer, Chinese Academy of Medical Sciences, Wuhan, Hubei, China.
Shi ZouDepartment of Infectious Diseases, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, China.
Jie LiuDepartment of Infectious Diseases, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, China.
Shihui SongDepartment of Infectious Diseases, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, China.
Qian DuDepartment of Infectious Diseases, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, China.
Min WangDepartment of Infection and Immunology, The First Hospital of Changsha City, 410000, Hengyang, Hunan, China. wangmin2828@163.com.
Ke LiangDepartment of Infectious Diseases, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, China. keliang@whu.edu.cn.

Funding

Medical Science Advancement Program (Basic Medical Sciences) of Wuhan University TFJC2018004Medical Science and Technology Innovation Platform Support Project of Zhongnan Hospital, Wuhan University PTXM2020008Non-profit Central Research Institute Fund of Chinese Academy of Medical Sciences 2020-PT320-004Science and Technology Innovation Cultivation Fund of Zhongnan Hospital, Wuhan University cxpy2017043
6 · The paper itself

Abstract

backgroundInformation on the comparison of blood microbiota between human immunodeficiency virus (HIV)-infected and HIV-uninfected patients with suspected sepsis by metagenomic next-generation sequencing (mNGS) is limited.

methodsRetrospectively analysis was conducted in HIV-infected and HIV-uninfected patients with suspected sepsis at Changsha First Hospital (China) from March 2019 to August 2022. Patients who underwent blood mNGS testing were enrolled. The blood microbiota detected by mNGS were analyzed.

resultsA total of 233 patients with suspected sepsis who performed blood mNGS were recruited in this study, including 79 HIV-infected and 154 HIV-uninfected patients. Compared with HIV-uninfected patients, the proportions of mycobacterium (p = 0.001), fungus (p < 0.001) and viruses (p < 0.001) were significantly higher, while the proportion of bacteria (p = 0.001) was significantly lower in HIV-infected patients. The higher positive rates of non-tuberculous mycobacteriosis (NTM, p = 0.022), Pneumocystis jirovecii (P. jirovecii) (p = 0.014), Talaromyces marneffei (T. marneffei) (p < 0.001) and cytomegalovirus (CMV) (p < 0.001) were observed in HIV-infected patients, compared with HIV-uninfected patients. In addition, compared with HIV-uninfected patients, the constituent ratio of T. marneffei (p < 0.001) in the fungus spectrum were significantly higher, while the constituent ratios of Candida (p < 0.001) and Aspergillus (p = 0.001) were significantly lower in HIV-infected patients.

conclusionsSignificant differences in the blood microbiota profiles exist between HIV-infected and HIV-uninfected patients with suspected sepsis.

Indexed as

High-Throughput Nucleotide SequencingHIV InfectionsMetagenomicsMicrobiotaSepsisAdultAgedBacteriaChinaFemaleHumansMaleMiddle AgedRetrospective StudiesBlood microbiotaHuman immunodeficiency virusMetagenomic next-generation sequencingSuspected sepsis

Identifiers

PMID39468445
PMCPMC11520051

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.