Evidence map›Paper›PMID 39466475›Full record

ArticleInsights into imaging2024

A radiomics-based interpretable machine learning model to predict the HER2 status in bladder cancer: a multicenter study.

Zongjie Wei, Xuesong Bai, Yingjie Xv, Shao-Hao Chen, Siwen Yin, Yang Li, Fajin Lv, Mingzhao Xiao, Yongpeng Xie

Abstract read
In one paragraph

Article in Insights into imaging, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  17. An interpretableFrontiers in oncology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zongjie WeiDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Xuesong BaiDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Yingjie XvDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Shao-Hao ChenDepartment of Urology, Urology Research Institute, The First Affiliated Hospital of Fujian Medical University, Fuzhou, China.
Siwen YinDepartment of Urology, Chongqing University Fuling Hospital, Chongqing, China.
Yang LiDepartment of Urology, Chongqing University Three Gorges Hospital, Chongqing, China.
Fajin LvDepartment of Radiology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Mingzhao XiaoDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China. mingzhaoxiao@cqmu.edu.cn.
Yongpeng XieDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China. xieyongpeng@cqmu.edu.cn.ORCID http://orcid.org/0009-0007-7790-3194

Funding

Natural Science Foundation of Chongqing Municipality cstc2020jcyj-msxmX0717
6 · The paper itself

Abstract

objectiveTo develop a computed tomography (CT) radiomics-based interpretable machine learning (ML) model to preoperatively predict human epidermal growth factor receptor 2 (HER2) status in bladder cancer (BCa) with multicenter validation.

methodsIn this retrospective study, 207 patients with pathologically confirmed BCa were enrolled and divided into the training set (n = 154) and test set (n = 53). Least absolute shrinkage and selection operator (LASSO) regression was used to identify the most discriminative features in the training set. Five radiomics-based ML models, namely logistic regression (LR), support vector machine (SVM), k-nearest neighbors (KNN), eXtreme Gradient Boosting (XGBoost) and random forest (RF), were developed. The predictive performance of established ML models was evaluated by the area under the receiver operating characteristic curve (AUC). The Shapley additive explanation (SHAP) was used to analyze the interpretability of ML models.

resultsA total of 1218 radiomics features were extracted from the nephrographic phase CT images, and 11 features were filtered for constructing ML models. In the test set, the AUCs of LR, SVM, KNN, XGBoost, and RF were 0.803, 0.709, 0.679, 0.794, and 0.815, with corresponding accuracies of 71.7%, 69.8%, 60.4%, 75.5%, and 75.5%, respectively. RF was identified as the optimal classifier. SHAP analysis showed that texture features (gray level size zone matrix and gray level co-occurrence matrix) were significant predictors of HER2 status.

conclusionsThe radiomics-based interpretable ML model provides a noninvasive tool to predict the HER2 status of BCa with satisfactory discriminatory performance. CRITICAL RELEVANCE STATEMENT: An interpretable radiomics-based machine learning model can preoperatively predict HER2 status in bladder cancer, potentially aiding in the clinical decision-making process. KEY POINTS: The CT radiomics model could identify HER2 status in bladder cancer. The random forest model showed a more robust and accurate performance. The model demonstrated favorable interpretability through SHAP method.

Indexed as

Bladder cancerComputed tomographyHER2Machine learningRadiomics

Identifiers

PMID39466475
PMCPMC11519251

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.