Evidence map›Paper›PMID 39465389›Full record

ArticleBMC plant biology2024

Genome-wide identification of alcohol dehydrogenase (ADH) gene family in oilseed rape (Brassica napus L.) and BnADH36 functional verification under salt stress.

Hao Zhang, Shanshan Wang, Ouqi Li, Changli Zeng, Xiaoyun Liu, Jing Wen, Lun Zhao, Tingdong Fu, Heping Wan, Jinxiong Shen

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. BnaGRP3 mediates salt tolerance via NaJournal of advanced research · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Hao ZhangNational Key Laboratory of Crop Genetic Improvement, National Engineering Research Center of Rapeseed, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Shanshan WangHubei Engineering Research Center for Protection and Utilization of Special Biological Resources in the Hanjiang River Basin, School of Life Science, Jianghan University, Wuhan, 430056, China.
Ouqi LiNational Key Laboratory of Crop Genetic Improvement, National Engineering Research Center of Rapeseed, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Changli ZengHubei Engineering Research Center for Protection and Utilization of Special Biological Resources in the Hanjiang River Basin, School of Life Science, Jianghan University, Wuhan, 430056, China.
Xiaoyun LiuHubei Engineering Research Center for Protection and Utilization of Special Biological Resources in the Hanjiang River Basin, School of Life Science, Jianghan University, Wuhan, 430056, China.
Jing WenNational Key Laboratory of Crop Genetic Improvement, National Engineering Research Center of Rapeseed, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Lun ZhaoNational Key Laboratory of Crop Genetic Improvement, National Engineering Research Center of Rapeseed, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Tingdong FuNational Key Laboratory of Crop Genetic Improvement, National Engineering Research Center of Rapeseed, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Heping WanHubei Engineering Research Center for Protection and Utilization of Special Biological Resources in the Hanjiang River Basin, School of Life Science, Jianghan University, Wuhan, 430056, China. wanheping@jhun.edu.cn.
Jinxiong ShenNational Key Laboratory of Crop Genetic Improvement, National Engineering Research Center of Rapeseed, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China. jxshen@mail.hzau.edu.cn.

Funding

Hubei Hongshan Laboratory research funding 2021HSZD004Natural Science Foundation of China U22A20469Natural Science Foundation of Hubei Province 2023AFB427the Fundamental Research Funds for the Central Universities 2662023PY004
6 · The paper itself

Abstract

backgroundAlcohol dehydrogenase (ADH) is an enzyme that binds to zinc, facilitating the interconversion of ethanol and acetaldehyde or other corresponding alcohols/aldehydes in the pathway of ethanol fermentation. It plays a pivotal role in responding to environmental stress. However, the response of the ADH family to abiotic stress remains unknown in rapeseed.

resultIn this study, we conducted a comprehensive genome-wide investigation of the ADH family in rapeseed, encompassing analysis of their gene structure, replication patterns, conserved motifs, cis-acting elements, and response to stress. A total of 47 ADH genes were identified within the rapeseed genome. Through phylogenetic analysis, BnADHs were classified into four distinct clades (I, II, IV, V). Prediction of protein domains revealed that all BnADH members possessed a GroES-like (ADH_N) domain and a zinc-bound (ADH_zinc_N) domain. Analysis of promoter sequences demonstrated that BnADHs contained numerous cis-acting elements associated with hormone and stress responses, indicating their widespread involvement in various biological regulatory processes. Expression profiling under different concentrations of salt stress treatments (0%, 0.4%, 0.8%, 1.0% NaCl) further highlighted the significant role played by the BnADH family in abiotic stress response mechanisms. Overexpression of BnADH36 in rapeseed significantly improved the salt tolerance of rapeseed.

conclusionThe features of the BnADH family in rapeseed was comprehensively characterized in this study, which could provide reference to the research of BnADHs in abiotic stress response.

Indexed as

Alcohol DehydrogenaseBrassica napusMultigene FamilyPhylogenyPlant ProteinsSalt StressGene Expression Regulation, PlantGenes, PlantGenome, PlantAlcohol DehydrogenasePlant ProteinsAlcohol dehydrogenaseBrassica napus L.Gene structureGenome-wide identificationSalt stress

Identifiers

PMID39465389
PMCPMC11520067

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.