Evidence map›Paper›PMID 39465352›Full record

ArticleExperimental & molecular medicine2024

Single-cell transcriptomic analysis reveals dynamic activation of cellular signaling pathways regulating beige adipogenesis.

Dong Soo Kyung, Eunmin Lee, Sehyun Chae, Yeonho Son, Ye-Jin Moon, Daehee Hwang, Jong Kyoung Kim, Yun-Hee Lee, Je Kyung Seong

Abstract read
In one paragraph

Article in Experimental & molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Dong Soo Kyung *Laboratory of Developmental Biology and Genomics, College of Veterinary Medicine, Interdisciplinary Program for Bioinformatics and Program for Cancer Biology, Seoul National University, Seoul, 08826, Republic of Korea.
Eunmin Lee *Department of New Biology, DGIST, Daegu, 42988, Republic of Korea.
Sehyun Chae *Division of Chemical Engineering and Bioengineering, College of Art, Culture and Engineering, Kangwon National University, Chuncheon, 24341, Republic of Korea.
Yeonho Son *College of Pharmacy and Research Institute of Pharmaceutical Sciences Seoul National University, Seoul, 08826, Republic of Korea.
Ye-Jin MoonCollege of Pharmacy and Research Institute of Pharmaceutical Sciences Seoul National University, Seoul, 08826, Republic of Korea.
Daehee HwangSchool of Biological Sciences, Seoul National University, Seoul, 08826, Republic of Korea. daehee@snu.ac.kr.ORCID 0000-0003-3608-0885
Jong Kyoung KimDepartment of New Biology, DGIST, Daegu, 42988, Republic of Korea. blkimjk@postech.ac.kr.ORCID 0000-0002-0257-0547
Yun-Hee LeeCollege of Pharmacy and Research Institute of Pharmaceutical Sciences Seoul National University, Seoul, 08826, Republic of Korea. yunhee.lee@snu.ac.kr.ORCID 0000-0002-0542-4705
Je Kyung SeongLaboratory of Developmental Biology and Genomics, College of Veterinary Medicine, Interdisciplinary Program for Bioinformatics and Program for Cancer Biology, Seoul National University, Seoul, 08826, Republic of Korea. snumouse@snu.ac.kr.ORCID 0000-0003-1177-6958

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PDGFRA+ cells have been identified as adipocyte stem cells (ASCs) that differentiate into beige adipocytes in white adipose tissue (WAT) following thermogenic stimuli. To elucidate the molecular heterogeneity of ASCs, we conducted single-cell transcriptomic profiling of PDGFRA+ cells isolated from the inguinal WAT (iWAT) of mice treated with the beta3 adrenergic receptor agonist CL316243. Single-cell RNA-seq revealed nine major clusters, which were categorized into four groups: resting, proliferating, differentiating, and adipogenic factor-expressing cells (AFECs). Trajectory analysis revealed sequential activation of molecular pathways, including the Hedgehog and Notch signaling pathways, during beige adipogenesis. AFECs expressed Dpp4 and did not differentiate into adipocytes in culture or after transplantation. Furthermore, genetic lineage tracing studies indicated that DPP4+ cells did not differentiate into adipocytes in iWAT during CL316243-induced beige adipogenesis. However, high-fat diet feeding led to the recruitment of adipocytes from DPP4+ cells in iWAT. Overall, this study improved our understanding of the dynamic molecular basis of beige adipogenesis and the potential contribution of DPP4+ adipocyte lineages to the pathological expansion of WAT during diet-induced obesity.

Indexed as

AdipogenesisDipeptidyl Peptidase 4Gene Expression ProfilingSignal TransductionSingle-Cell AnalysisTranscriptomeAdipocytes, BeigeAdipose Tissue, WhiteAnimalsCell DifferentiationDiet, High-FatDioxolesMaleMiceMice, Inbred C57BLStem CellsDioxolesDipeptidyl Peptidase 4disodium (R,R)-5-(2-((2-(3-chlorophenyl)-2-hydroxyethyl)-amino)propyl)-1,3-benzodioxole-2,3-dicarboxylateDpp4 protein, mouse

Identifiers

PMID39465352
PMCPMC11541910

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.