Evidence map›Paper›PMID 39465323›Full record

ArticleScientific reports2024

Spatiotemporal control of transgene expression using an infrared laser in the crustacean Daphnia magna.

Rina Shimizu, Joe Sakamoto, Nikko Adhitama, Mana Fujikawa, Pijar Religia, Yasuhiro Kamei, Hajime Watanabe, Yasuhiko Kato

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Rina ShimizuDepartment of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka, Japan.
Joe SakamotoOptics and Imaging Facility, National Institute for Basic Biology, Okazaki, Japan.
Nikko AdhitamaDepartment of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka, Japan.
Mana FujikawaDepartment of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka, Japan.
Pijar ReligiaDepartment of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka, Japan.
Yasuhiro KameiOptics and Imaging Facility, National Institute for Basic Biology, Okazaki, Japan.
Hajime WatanabeDepartment of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka, Japan.
Yasuhiko KatoDepartment of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka, Japan. kato_yasuhiko@bio.eng.osaka-u.ac.jp.

Funding

Japan Society for the Promotion of Science 23K21753, 21H03602Japan Society for the Promotion of Science 24H01367 , 23K23964, 23K18048, 22H05598, 22H02701, 20H04923, 19H05423NIBB Collaborative Research Project for Integrative Imaging 22NIBB505, 21-405, 20-509, 19-511
6 · The paper itself

Abstract

The crustacean Daphnia magna is an emerging model for ecological and toxicological genomics. However, the lack of methods for spatial and temporal control of gene expression has impaired the elucidation of molecular mechanisms underlying responses to environments in vivo. Here we report local activation of the hsp70 promoter-driven gene cassette in D. magna by the infrared laser-evoked gene operator (IR-LEGO), a method for heating the target cells with infrared irradiation. We identified the heat-inducible promoter upstream of the D. magna hsp70-A gene. Using this promoter, we generated a transgenic Daphnia harboring the heat-shock responsive GFP reporter gene and confirmed that the GFP gene responds to heat treatment not only in juveniles and adults but also in embryos. We collected embryos from the reporter line and irradiated four different regions of interest in the embryos: a proximal region of the third thoracic segment, a part of the midline, a second maxilla, and a distal region of the endopodite of the second antenna, all of which increased GFP fluorescence with an infrared laser. Our results suggest that the IR-LEGO method is useful for spatial and temporal control of gene expression and would advance the functional genomics in D. magna.

Indexed as

Animals, Genetically ModifiedDaphniaGreen Fluorescent ProteinsHSP70 Heat-Shock ProteinsInfrared RaysLasersPromoter Regions, GeneticTransgenesAnimalsDaphnia magnaGene Expression RegulationGenes, ReporterSpatio-Temporal AnalysisGreen Fluorescent ProteinsHSP70 Heat-Shock Proteins

Identifiers

PMID39465323
PMCPMC11514169

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.