Evidence map›Paper›PMID 39464009›Full record

ArticlebioRxiv : the preprint server for biology2024

Torsion is a Dynamic Regulator of DNA Replication Stalling and Reactivation.

Xiaomeng Jia, Xiang Gao, Shuming Zhang, James T Inman, Yifeng Hong, Anupam Singh, Smita Patel, Michelle D Wang

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Xiaomeng JiaHoward Hughes Medical Institute, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-1754-7198
Xiang GaoHoward Hughes Medical Institute, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-1289-8319
Shuming ZhangHoward Hughes Medical Institute, Cornell University, Ithaca, NY 14853, USA.
James T InmanHoward Hughes Medical Institute, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0003-3534-0323
Yifeng HongDepartment of Electrical and Computer Engineering, Cornell University, Ithaca, New York 14853, USA.ORCID 0000-0002-4444-4848
Anupam SinghDepartment of Biochemistry and Molecular Biology, Robert Wood Johnson Medical School, Rutgers University, Piscataway, NJ, USA.ORCID 0000-0003-0092-5102
Smita PatelDepartment of Biochemistry and Molecular Biology, Robert Wood Johnson Medical School, Rutgers University, Piscataway, NJ, USA.ORCID 0000-0002-2523-4933
Michelle D WangHoward Hughes Medical Institute, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0001-9137-3790

Funding

Mechanistic studies of nucleic acid enzymes involved in DNA replication, transcription, and innate immunity.R35GM118086 · NIGMS · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI SMITA S PATEL · 2016 to 2026
$8.9M
Fundamental Biological Processes Under TorsionR01GM136894 · NIGMS · CORNELL UNIVERSITY · PI WANG, MICHELLE D. · 2020 to 2023
$1.2M
NIGMS NIH HHS R01 GM136894NIGMS NIH HHS R35 GM118086
6 · The paper itself

Abstract

The inherent helical structure of DNA dictates that a replisome must rotate relative to DNA during replication, presenting inevitable topological challenges to replication. However, little is known about how the replisome progresses against torsional stress. Here, we developed a label-free, high-resolution, real-time assay to monitor replisome movement under torsion. We visualized the replisome rotation of DNA and determined how the replisome slows down under torsion. We found that while helicase or DNA polymerase (DNAP) individually is a weak torsional motor, the replisome composed of both enzymes is the most powerful DNA torsional motor studied to date. It generates ~ 22 pN·nm of torque before stalling, twice the stall torque of

Identifiers

PMID39464009
PMCPMC11507786

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.