Evidence map›Paper›PMID 39463921›Full record

ArticleJournal of the American Statistical Association2024

Addressing Multiple Detection Limits with Semiparametric Cumulative Probability Models.

Yuqi Tian, Chun Li, Shengxin Tu, Nathan T James, Frank E Harrell, Bryan E Shepherd

Abstract read
In one paragraph

Article in Journal of the American Statistical Association, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yuqi TianDepartment of Biostatistics, Vanderbilt University, California.
Chun LiDepartment of Population and Public Health Sciences, University of Southern California.
Shengxin TuDepartment of Biostatistics, Vanderbilt University, California.
Nathan T JamesDepartment of Biostatistics, Vanderbilt University, California.
Frank E HarrellDepartment of Biostatistics, Vanderbilt University, California.
Bryan E ShepherdDepartment of Biostatistics, Vanderbilt University, California.

Funding

CCASAnet: Caribbean, Central and South America NetworkU01AI069923 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Pedro Enrique Cahn, Jessica L Castilho · 2006 to 2026
$41.6M
Statistical Methods for Ordinal Variables in HIV/AIDS StudiesR01AI093234 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Chun Li, Bryan Earl Shepherd · 2011 to 2026
$4.9M
NIAID NIH HHS R01 AI093234NIAID NIH HHS U01 AI069923
6 · The paper itself

Abstract

Detection limits (DLs), where a variable cannot be measured outside of a certain range, are common in research. DLs may vary across study sites or over time. Most approaches to handling DLs in response variables implicitly make strong parametric assumptions on the distribution of data outside DLs. We propose a new approach to deal with multiple DLs based on a widely used ordinal regression model, the cumulative probability model (CPM). The CPM is a rank-based, semiparametric linear transformation model that can handle mixed distributions of continuous and discrete outcome variables. These features are key for analyzing data with DLs because while observations inside DLs are continuous, those outside DLs are censored and generally put into discrete categories. With a single lower DL, CPMs assign values below the DL as having the lowest rank. With multiple DLs, the CPM likelihood can be modified to appropriately distribute probability mass. We demonstrate the use of CPMs with DLs via simulations and a data example. This work is motivated by a study investigating factors associated with HIV viral load 6 months after starting antiretroviral therapy in Latin America; 56% of observations are below lower DLs that vary across study sites and over time.

Indexed as

HIVLimit of detectionordinal regression modeltransformation model

Identifiers

PMID39463921
PMCPMC11500994

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.