Evidence map›Paper›PMID 39462452›Full record

ArticleThe Plant journal : for cell and molecular biology2024

Temporally resolved growth patterns reveal novel information about the polygenic nature of complex quantitative traits.

Dorothy D Sweet, Sara B Tirado, Julian Cooper, Nathan M Springer, Cory D Hirsch, Candice N Hirsch

Abstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dorothy D SweetDepartment of Agronomy and Plant Genetics, University of Minnesota, Saint Paul, Minnesota, 55108, USA.ORCID 0000-0002-9614-5436
Sara B TiradoDepartment of Agronomy and Plant Genetics, University of Minnesota, Saint Paul, Minnesota, 55108, USA.ORCID 0000-0003-0432-091X
Julian CooperDepartment of Plant Pathology, University of Minnesota, Saint Paul, Minnesota, 55108, USA.ORCID 0000-0001-8390-3915
Nathan M SpringerDepartment of Plant and Microbial Biology, University of Minnesota, Saint Paul, Minnesota, 55108, USA.ORCID 0000-0002-7301-4759
Cory D HirschDepartment of Plant Pathology, University of Minnesota, Saint Paul, Minnesota, 55108, USA.ORCID 0000-0002-3409-758X
Candice N HirschDepartment of Agronomy and Plant Genetics, University of Minnesota, Saint Paul, Minnesota, 55108, USA.ORCID 0000-0002-8833-3023

Funding

Bayer/University of Minnesota Multifunctional Agriculture Initiative Graduate Student FellowshipDivision of Integrative Organismal Systems IOS-1546727Minnesota Corn Research and Promotion CouncilUniversity of Minnesota APS Metric Funds FellowshipUniversity of Minnesota Graduate Opportunity FellowshipUniversity of Minnesota MnDRIVE Global Food Ventures Graduate Fellowship
6 · The paper itself

Abstract

Plant height can be an indicator of plant health across environments and used to identify superior genotypes. Typically plant height is measured at a single timepoint when plants reach terminal height. Evaluating plant height using unoccupied aerial vehicles allows for measurements throughout the growing season, facilitating a better understanding of plant-environment interactions and the genetic basis of this complex trait. To assess variation throughout development, plant height data was collected from planting until terminal height at anthesis (14 flights 2018, 27 in 2019, 12 in 2020, and 11 in 2021) for a panel of ~500 diverse maize inbred lines. The percent variance explained in plant height throughout the season was significantly explained by genotype (9-48%), year (4-52%), and genotype-by-year interactions (14-36%) to varying extents throughout development. Genome-wide association studies revealed 717 significant single nucleotide polymorphisms associated with plant height and growth rate at different parts of the growing season specific to certain phases of vegetative growth. When plant height growth curves were compared to growth curves estimated from canopy cover, greater Fréchet distance stability was observed in plant height growth curves than for canopy cover. This indicated canopy cover may be more useful for understanding environmental modulation of overall plant growth and plant height better for understanding genotypic modulation of overall plant growth. This study demonstrated that substantial information can be gained from high temporal resolution data to understand how plants differentially interact with the environment and can enhance our understanding of the genetic basis of complex polygenic traits.

Indexed as

Genome-Wide Association StudyGenotypeMultifactorial InheritancePolymorphism, Single NucleotideZea maysGene-Environment InteractionPhenotypeQuantitative Trait LociSeasonscanopy coverFréchet distancegenome‐wide association studiesgenotype‐by‐environment interactionplant heightunoccupied aerial vehiclesZea mays L

Identifiers

PMID39462452
PMCPMC11629746

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.