Evidence map›Paper›PMID 39462143›Full record

ArticleScientific reports2024

Urogenital colonization and pathogenicity of E. Coli in the vaginal microbiota during pregnancy.

Nassim Boutouchent, Thi Ngoc Anh Vu, Luce Landraud, Sean P Kennedy

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Research Progress on perinatalFrontiers in microbiology · 2026
    Review
  5. Review
  6. Article
  7. Article
  8. Bacteriophage-mediated reduction of uropathogenicbioRxiv : the preprint server for biology · 2025
    Article
  9. Review
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nassim BoutouchentDepartment of Computational Biology, Institut Pasteur, Université Paris Cité, 75015, Paris, France.
Thi Ngoc Anh VuVNU-Institute of Microbiology and Biotechnology, Vietnam National University, Hanoi, Vietnam.
Luce LandraudUniversité Paris Cité and Université Sorbonne Paris Nord, INSERM, IAME, F-75018, Paris, France.
Sean P KennedyDepartment of Computational Biology, Institut Pasteur, Université Paris Cité, 75015, Paris, France. sean.kennedy@pasteur.fr.

Funding

Programme d'Investissements d'avenir and BPIfrance DOS0053477 SUB & DOS0053473 ARUniversity Hospital of Rouen Normandy Bourse Année Recherche (BAR) 2023-24
6 · The paper itself

Abstract

This study explores the role of the vaginal microbiota (VM) in the pathophysiology of asymptomatic bacteriuria (ASB) in a cohort of 1,553 pregnant women. Worldwide, E. coli remains the most common etiological agent of bacteriuria during pregnancy and also a major causative agent of newborn infections. A healthy VM is typically characterized by low diversity and is dominated by lactic acid-producing species, notably those from the Lactobacillus genus. Our results point to decreases in Lactobacillus spp associated with an increase of gut-microbiota-associated species from the Enterobacterales order. Escherichia coli exhibited the most pronounced increase in abundance within the VM during bacteriuria and was notably associated with ASB. Molecular typing and antimicrobial resistance characterization of 72 metagenome assembled E. coli genomes (MAGs) from these pregnant women revealed a genomic signature of extraintestinal pathogenic E. coli ("ExPEC") strains, which are involved in various extraintestinal infections such as urinary tract infections, newborn infections and bacteremia. Microbial diversity within the vaginal samples from which an E. coli MAG was obtained showed a substantial variation, primarily marked by a decrease in abundance of Lactobacillus species. Overall, our study shows how disruption in key bacterial group within the VM can disrupt its stability, potentially leading to the colonization by opportunistic pathogens.

Indexed as

BacteriuriaEscherichia coliEscherichia coli InfectionsReproductive Tract InfectionsVaginaAdultEnterobacteriaceaeFemaleGenome, BacterialHumansLactobacillusMicrobiotaPregnancyPregnancy Complications, InfectiousBacteriuriaExtra-intestinal pathogenic E. Coli (ExPEC)Genome AssemblyMicrobial diversityUrinary tract infection (UTI)Vaginal microbiota

Identifiers

PMID39462143
PMCPMC11513020

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.