Evidence map›Paper›PMID 39460820›Full record

ArticleJournal of cancer research and clinical oncology2024

Genetic inference and single cell expression analysis of potential targets in heart failure and breast cancer.

Yue Li, Ying Huang, Ning An, Xiaomiao Guan, Bing Liu, Huiying Li, Tingting Jiang

RetractedAbstract readRetracted Publication
In one paragraph

Article in Journal of cancer research and clinical oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Yue LiDepartment of Cardiovascular, Liaoning Jinqiu Hospital, No. 317 Xiaonan Street, Shenhe District, Shenyang, Liaoning Province, 110016, China.
Ying HuangDepartment of Cardiovascular, Liaoning Jinqiu Hospital, No. 317 Xiaonan Street, Shenhe District, Shenyang, Liaoning Province, 110016, China.
Ning AnDepartment of Cardiovascular, Liaoning Jinqiu Hospital, No. 317 Xiaonan Street, Shenhe District, Shenyang, Liaoning Province, 110016, China.
Xiaomiao GuanDepartment of Nursing, Shengjing Hospital of China Medical University, No. 39 Huaxiang Road, Tiexi District, Shenyang, Liaoning Province, 110022, China.
Bing LiuDepartment of Nursing, Shengjing Hospital of China Medical University, No. 39 Huaxiang Road, Tiexi District, Shenyang, Liaoning Province, 110022, China.
Huiying LiDepartment of Nursing, Shengjing Hospital of China Medical University, No. 39 Huaxiang Road, Tiexi District, Shenyang, Liaoning Province, 110022, China.
Tingting JiangDepartment of Nursing, Shengjing Hospital of China Medical University, No. 39 Huaxiang Road, Tiexi District, Shenyang, Liaoning Province, 110022, China. jiangtingting@sj-hospital.org.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBreast cancer and heart failure are major public health issues globally, characterized by significant genetic heterogeneity and complex molecular mechanisms. This study aims to explore potential genetic targets in heart failure and breast cancer through combining genetic inference and single-cell expression analysis, and to assess the causal relationships of these targets using Mendelian randomization methods.

methodsWe first identified genetic variants associated with heart failure and breast cancer using genome-wide association study (GWAS) data. Subsequently, we analyzed the expression patterns of these genetic variants in different cell types through single-cell RNA sequencing technology. Furthermore, we utilized in vitro experiment to assess the effects of ITM2B on MCF7 using immunofluorescence.

resultsOur study identified multiple genetic variants associated with heart failure and breast cancer, showing specific expression patterns in heart and breast cells. The ITM2B gene is highly expressed in breast cancer. ITM2B shows the highest expression in T cells and the lowest expression in proliferating cells. Silencing the ITM2B gene can promote apoptosis and inhibit proliferation and migration of MCF7 breast cancer cells.

conclusionBy integrating genetic inference and single-cell expression analysis, this study revealed potential genetic targets in heart failure and breast cancer, and validated the causal effects of these targets using Mendelian randomization methods.

Indexed as

Breast NeoplasmsGenome-Wide Association StudyHeart FailureMendelian Randomization AnalysisSingle-Cell AnalysisApoptosisCell ProliferationFemaleGenetic Predisposition to DiseaseHumansMCF-7 CellsPolymorphism, Single NucleotideBreast cancerGenetic inferenceHeart failurePotential targetSingle cell expression analysis

Identifiers

PMID39460820
PMCPMC11512850

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.