Evidence map›Paper›PMID 39460798›Full record

ArticleArchives of dermatological research2024

Unveiling the genetic link and pathogenesis between psoriasis and IgA nephropathy based on Mendelian randomization and transcriptome data analyses.

Yingwen Chen, Min Huang, Ziqing You, Rule Sa, Lu Zhao, Congwen Ku, Wenying Wang, Xingwu Duan

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Article in Archives of dermatological research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

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4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Yingwen ChenDongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, 100700, China.
Min HuangDongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, 100700, China.
Ziqing YouDongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, 100700, China.
Rule SaDongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, 100700, China.
Lu ZhaoDongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, 100700, China.
Congwen KuDongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, 100700, China.
Wenying WangDongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, 100700, China. wly167@163.com.
Xingwu DuanDongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, 100700, China. xwduan@sina.com.

Funding

National Natural Science Foundation of China NO:82074436
6 · The paper itself

Abstract

It has been reported that many people with psoriasis have been diagnosed with secondary IgA nephropathy (IgAN). However, the mechanisms behind the association between psoriasis and IgAN have not been well clarified. The connection between psoriasis and IgAN deserves deeper exploration. Mendelian randomization (MR) analysis would be employed to explore the link of causality between IgAN and psoriasis, psoriasis vulgaris, other and unspecified psoriasis, guttate psoriasis, and arthropathic psoriasis. Transcriptomic analyses were carried out against the Gene Expression Omnibus databases. We identified crosstalk genes through the analysis of Differentially expressed genes and weight gene co-expression network analysis. Functional annotations were enriched for these crosstalk genes. Subsequently, we established a protein-protein interaction network, and candidate genes would be discovered through the utilization of the MCODE and CytoHubba plug-in applications. Lastly, the predictive efficacy of these genes was examined via creating receiver operating characteristic curves. The MR analysis suggested that psoriasis vulgaris patients were at a higher risk for IgAN. [OR = 1.040, 95%CI (1.005,1.076), p = 0.026 < 0.05]. Additionally, arthropathic psoriasis may augment the incidence of IgAN [OR = 1.081, 95%CI (1.040-1.124), p < 0.01] in the European population. Through the analysis of DEGs and WGCNA, we identified 12 significant genes (NETO2, RRM2, SLAMF7, GBP1, KIF20A, CCL4, MMP1, IL1β, NDC80, CXCL9, C15orf48, GSTA3), which may be potential crosstalk genes between the two diseases. Then, the functional annotation results indicated that the crosstalk genes seemed primarily involved in immune and inflammatory responses. By establishing the PPI network, we further discovered that CXCL9, IL1β, CCL4, and MMP1 play a vital part in psoriasis and IgAN, and all have good diagnostic values. Our MR analysis provided evidence that genetic vulnerability to IgAN may be associated with an elevated risk of psoriasis vulgaris and arthropathic psoriasis respectively among Europeans. Doctors should be aware of these associations when patients with psoriasis present with renal dysfunction, especially those with psoriasis vulgaris and arthropathic psoriasis. Chronic inflammation, drug effects, and immunity may contribute to the generation and development of both diseases. IL1β, CXCL9, CCL4, and MMP1 may be core biomarkers for psoriasis and IgAN.

Indexed as

Genetic Predisposition to DiseaseGlomerulonephritis, IGAMendelian Randomization AnalysisPsoriasisGene Expression ProfilingGene Regulatory NetworksHumansInterleukin-1betaMatrix Metalloproteinase 1Protein Interaction MapsTranscriptomeInterleukin-1betaMatrix Metalloproteinase 1MMP1 protein, humanImmunoglobulin a nephropathyMendelian randomizationPsoriasisTranscriptome analyses

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.