Evidence map›Paper›PMID 39459879›Full record

ArticleViruses2024

First Detection and Characterization of

Antonio Charlys da Costa, Tania Regina Tozetto-Mendoza, Endrya do Socorro Foro Ramos, Pietro Bortoletto, Noely Evangelista Ferreira, Layla Honorato, Erick Matheus Garcia Barbosa, Heuder Gustavo Oliveira Paião, Amanda Fernandes de Souza, Iara M Linhares and 4 more

Abstract read
In one paragraph

Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Antonio Charlys da CostaLaboratorio de Virologia (LIM52), Departamento de Infectologia e Medicina Tropical, Instituto de Medicina Tropical de São Paulo, Faculdade de Medicina da Universidade de São Paulo, Av. Dr Enéas de Carvalho Aguiar, 470, São Paulo 05403-000, Brazil.ORCID 0000-0001-5516-5177
Tania Regina Tozetto-MendozaLaboratorio de Virologia (LIM52), Departamento de Infectologia e Medicina Tropical, Instituto de Medicina Tropical de São Paulo, Faculdade de Medicina da Universidade de São Paulo, Av. Dr Enéas de Carvalho Aguiar, 470, São Paulo 05403-000, Brazil.
Endrya do Socorro Foro RamosLaboratório de Diversidade Viral, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, Brazil.ORCID 0000-0001-5229-896X
Pietro BortolettoBoston IVF-The Eugin Group, Waltham 02451, MA, USA.ORCID 0000-0003-4329-3141
Noely Evangelista FerreiraLaboratorio de Virologia (LIM52), Departamento de Infectologia e Medicina Tropical, Instituto de Medicina Tropical de São Paulo, Faculdade de Medicina da Universidade de São Paulo, Av. Dr Enéas de Carvalho Aguiar, 470, São Paulo 05403-000, Brazil.
Layla HonoratoLaboratorio de Virologia (LIM52), Departamento de Infectologia e Medicina Tropical, Instituto de Medicina Tropical de São Paulo, Faculdade de Medicina da Universidade de São Paulo, Av. Dr Enéas de Carvalho Aguiar, 470, São Paulo 05403-000, Brazil.ORCID 0000-0001-7084-3095
Erick Matheus Garcia BarbosaLaboratorio de Virologia (LIM52), Departamento de Infectologia e Medicina Tropical, Instituto de Medicina Tropical de São Paulo, Faculdade de Medicina da Universidade de São Paulo, Av. Dr Enéas de Carvalho Aguiar, 470, São Paulo 05403-000, Brazil.
Heuder Gustavo Oliveira PaiãoLaboratorio de Virologia (LIM52), Departamento de Infectologia e Medicina Tropical, Instituto de Medicina Tropical de São Paulo, Faculdade de Medicina da Universidade de São Paulo, Av. Dr Enéas de Carvalho Aguiar, 470, São Paulo 05403-000, Brazil.ORCID 0000-0002-4358-1146
Amanda Fernandes de SouzaLaboratorio de Virologia (LIM52), Departamento de Infectologia e Medicina Tropical, Instituto de Medicina Tropical de São Paulo, Faculdade de Medicina da Universidade de São Paulo, Av. Dr Enéas de Carvalho Aguiar, 470, São Paulo 05403-000, Brazil.
Iara M LinharesDepartment of Gynecology and Obstetrics, Faculdade de Medicina da Universidade de São Paulo, São Paulo 05403-000, Brazil.
Steven D SpandorferCenter for Reproductive Medicine and Infertility, Weill Cornell Medicine, New York 10001, NY, USA.
Elcio LealLaboratório de Diversidade Viral, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, Brazil.ORCID 0000-0003-3463-0492
Maria Cassia Mendes-CorreaLaboratorio de Virologia (LIM52), Departamento de Infectologia e Medicina Tropical, Instituto de Medicina Tropical de São Paulo, Faculdade de Medicina da Universidade de São Paulo, Av. Dr Enéas de Carvalho Aguiar, 470, São Paulo 05403-000, Brazil.
Steven S WitkinLaboratorio de Virologia (LIM52), Departamento de Infectologia e Medicina Tropical, Instituto de Medicina Tropical de São Paulo, Faculdade de Medicina da Universidade de São Paulo, Av. Dr Enéas de Carvalho Aguiar, 470, São Paulo 05403-000, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

background

objectiveWe evaluated human vaginal samples for the presence and maintenance of

methodsViral metagenomics analysis was performed on vaginal samples collected from 28 apparently healthy women in New York City, USA. Twenty-one of the women provided duplicate samples over a 12-21-day interval.

resultsPhylogenetic analysis identified two samples from the same individual, collected over a twelve-day interval, that were positive for the complete

conclusionsThe continuous presence of

Indexed as

Genome, ViralPhylogenyVaginaAdultDNA, ViralDNA VirusesFemaleHumansMetagenomicsMiddle AgedNew York CityYoung AdultDNA, Viralgenomic characterizationmetagenomicsSmacovirusvagina

Identifiers

PMID39459879
PMCPMC11512292

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.