Pangenome Data Analysis Reveals Characteristics of Resistance Gene Analogs Associated with

Yan Lu, Jiaying Huang, Dongqi Liu, Xiangjiu Kong, Yang Song, Lan Jing

Abstract read

In one paragraph

Article in Life (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it

0cells of the map it votes in

0citing papers in PubMed

–field-weighted citation impact

1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yan LuCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Huhhot 010011, China.

Jiaying HuangCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Huhhot 010011, China.

Dongqi LiuCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Huhhot 010011, China.

Xiangjiu KongCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Huhhot 010011, China.

Yang SongCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Huhhot 010011, China.

Lan JingCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Huhhot 010011, China.

Funding

National Natural Science Foundation of China 32060598National Natural Science Foundation of China 32160642the Program for Innovative Research Team in Universities of Inner Mongolia Autonomous Region NMGIRT2320

6 · The paper itself

Abstract

The sunflower, an important oilseed crop and food source across the world, is susceptible to several pathogens, which cause severe losses in sunflower production. The utilization of genetic resistance is the most economical, effective measure to prevent infectious diseases. Based on the sunflower pangenome, in this study, we explored the variability of resistance gene analogs (RGAs) within the species. According to a comparative analysis of RGA candidates in the sunflower pangenome using the RGAugury pipeline, a total of 1344 RGAs were identified, comprising 1107 conserved, 199 varied, and 38 rare RGAs. We also identified RGAs associated with resistance against

Indexed as

pangenomeresistance geneRGAugurySclerotinia sclerotiorumsunflower

Identifiers

PMID39459622

DOI10.3390/life14101322

PMCPMC11509514

What OpenQuestion holds

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LicenceCC BY

Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.