Evidence map›Paper›PMID 39457877›Full record

ArticleAnimals : an open access journal from MDPI2024

Comparative Transcriptome Analysis of Bovine, Porcine, and Sheep Muscle Using Interpretable Machine Learning Models.

Yaqiang Guo, Shuai Li, Rigela Na, Lili Guo, Chenxi Huo, Lin Zhu, Caixia Shi, Risu Na, Mingjuan Gu, Wenguang Zhang

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yaqiang GuoCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010010, China.
Shuai LiCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010010, China.
Rigela NaCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010010, China.
Lili GuoCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010010, China.
Chenxi HuoCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010010, China.ORCID 0009-0004-8988-4638
Lin ZhuCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010010, China.
Caixia ShiCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010010, China.
Risu NaCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010010, China.
Mingjuan GuCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010010, China.ORCID 0000-0002-8244-9519
Wenguang ZhangCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010010, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The growth and development of muscle tissue play a pivotal role in the economic value and quality of meat in agricultural animals, garnering close attention from breeders and researchers. The quality and palatability of muscle tissue directly determine the market competitiveness of meat products and the satisfaction of consumers. Therefore, a profound understanding and management of muscle growth is essential for enhancing the overall economic efficiency and product quality of the meat industry. Despite this, systematic research on muscle development-related genes across different species still needs to be improved. This study addresses this gap through extensive cross-species muscle transcriptome analysis, combined with interpretable machine learning models. Utilizing a comprehensive dataset of 275 publicly available transcriptomes derived from porcine, bovine, and ovine muscle tissues, encompassing samples from ten distinct muscle types such as the semimembranosus and longissimus dorsi, this study analyzes 113 porcine (

Indexed as

comparative transcriptomicskey genesmachine learningmuscle growth and developmentSHAP

Identifiers

PMID39457877
PMCPMC11506101

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.