Evidence map›Paper›PMID 39456631›Full record

ArticleCancers2024

Functional Targets for Epstein-Barr Virus BART MicroRNAs in B Cell Lymphomas.

Devin N Fachko, Bonnie Goff, Yan Chen, Rebecca L Skalsky

Abstract read
In one paragraph

Article in Cancers, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. A Critical Role for Epstein-Barr Virus in Primary Effusion Lymphoma.Current topics in microbiology and immunology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Devin N FachkoVaccine and Gene Therapy Institute, Oregon Health and Science University, Beaverton, OR 97006, USA.ORCID 0000-0003-1646-8102
Bonnie GoffVaccine and Gene Therapy Institute, Oregon Health and Science University, Beaverton, OR 97006, USA.ORCID 0009-0001-2666-2892
Yan ChenVaccine and Gene Therapy Institute, Oregon Health and Science University, Beaverton, OR 97006, USA.
Rebecca L SkalskyVaccine and Gene Therapy Institute, Oregon Health and Science University, Beaverton, OR 97006, USA.

Funding

microRNA Regulation of Gamma-herpesvirus Latency and ReactivationR01AI143620 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI SKALSKY, REBECCA L · 2019 to 2023
$2.5M
NIH HHS R01 AI143620
6 · The paper itself

Abstract

MicroRNAs are key post-transcriptional regulators of gene expression and their dysregulation is often linked to cancer. Epstein-Barr virus encodes 22 BamHI A Rightward Transcript (BART) miRNAs, which are expressed in nearly all EBV-associated cancers and implicated in viral pathogenesis. To investigate biological targets for BART miRNAs in B cell lymphomas, we performed a meta-analysis of publicly available Ago-CLIP datasets from EBV-positive Burkitt lymphomas (BLs), primary effusion lymphomas (PELs), AIDS-associated diffuse large B cell lymphomas (DLBCLs), and lymphoblastoid cell lines (LCLs). Our analysis focused on comparing targets of EBV BART miRNAs across the different types of transformed B cells. Using reporter assays, we then experimentally validated over 50 functional interactions between BART miRNAs and cellular protein-coding transcripts involved in activities such as B cell differentiation (

Indexed as

BART miRNAsB cell lymphomaEpstein-Barr virusmicroRNAs

Identifiers

PMID39456631
PMCPMC11506495

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.