Evidence map›Paper›PMID 39454238›Full record

ReviewAdvances in biological regulation2024

Sphingosine phosphate lyase insufficiency syndrome as a primary immunodeficiency state.

Saber Gharagozlou, NicolaA M Wright, Luis Murguia-Favela, Juliette Eshleman, Julian Midgley, Seha Saygili, Georgie Mathew, Harry Lesmana, Nadia Makkoukdji, Melissa Gans and 1 more

Abstract readReview
In one paragraph

Review in Advances in biological regulation, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Saber GharagozlouDepartment of Pediatrics, University of California San Francisco, San Francisco, CA, USA. Electronic address: Saber.Gharagozlou@ucsf.edu.
NicolaA M WrightDepartment of Pediatrics, Cummings School of Medicine, University of Calgary, Alberta, Canada. Electronic address: Nicola.Wright@albertahealthservices.ca.
Luis Murguia-FavelaDepartment of Pediatrics, Cummings School of Medicine, University of Calgary, Alberta, Canada. Electronic address: Luis.MurguiaFavela@albertahealthservices.ca.
Juliette EshlemanDepartment of Pediatrics, Cummings School of Medicine, University of Calgary, Alberta, Canada. Electronic address: Juliette.eshleman@ucalgary.ca.
Julian MidgleyDepartment of Pediatrics, Cummings School of Medicine, University of Calgary, Alberta, Canada. Electronic address: Julian.Midgley@albertahealthservices.ca.
Seha SaygiliDepartment of Pediatric Nephrology, Istanbul University-Cerrahpasa, Cerrahpasa Faculty of Medicine, Istanbul, Turkey. Electronic address: sehakamil.saygili@iuc.edu.tr.
Georgie MathewDivision of Pediatric Nephrology, Christian Medical College, Vellore, India. Electronic address: Georgie.mathew@cmcvellore.ac.in.
Harry LesmanaDepartment of Medical Genetics and Genomics, Department of Pediatric Hematology/Oncology and BMT, Cleveland Clinic, Cleveland, OH, USA. Electronic address: LESMANH@ccf.org.
Nadia MakkoukdjiDepartment of Pediatrics, Division of Allergy & Immunology University of Miami Miller School of Medicine/Jackson Memorial Hospital, Miami, FL, USA. Electronic address: Nadia.makkoukdjidep@jhsmiami.org.
Melissa GansDepartment of Pediatrics, Division of Allergy & Immunology University of Miami Miller School of Medicine/Jackson Memorial Hospital, Miami, FL, USA. Electronic address: Melissa.Gans@med.miami.edu.
Julie D SabaDepartment of Pediatrics, University of California San Francisco, San Francisco, CA, USA. Electronic address: Julie.Saba@ucsf.edu.

Funding

Characterizing the natural history of sphingosine phosphate lyase insufficiency syndrome (SPLIS): a fundamental step in the development of a targeted cure for this novel atypical sphingolipidosisR01HD113778 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JULIE D SABA · 2024 to 2026
$2.3M
Proof-of-concept for the use of enzyme replacement therapy as a lifesaving treatment for sphingosine phosphate lyase insufficiency syndromeR21TR005157 · NCATS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SABA, JULIE D · 2024 to 2024
$463k
Validating absolute lymphocyte count and plasma sphingosine-1-phosphate as disease biomarkers of sphingosine phosphate lyase insufficiency syndrome in anticipation of a pyridoxine clinical trialR21TR004262 · NCATS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SABA, JULIE D · 2022 to 2023
$444k
NCATS NIH HHS R21 TR004262NCATS NIH HHS R21 TR005157NICHD NIH HHS R01 HD113778
6 · The paper itself

Abstract

Sphingosine phosphate lyase insufficiency syndrome (SPLIS) is a genetic disease associated with renal, endocrine, neurological, skin and immune defects. SPLIS is caused by inactivating mutations in SGPL1, which encodes sphingosine phosphate lyase (SPL). SPL catalyzes the irreversible degradation of the bioactive sphingolipid sphingosine-1-phosphate (S1P), a key regulator of lymphocyte egress. The SPL reaction represents the only exit point of sphingolipid metabolism, and SPL insufficiency causes widespread sphingolipid derangements that could additionally contribute to immunodeficiency. Herein, we review SPLIS, the sphingolipid metabolic pathway, and various roles sphingolipids play in immunity. We then explore SPLIS-related immunodeficiency by analyzing data available in the published literature supplemented by medical record reviews in ten SPLIS children. We found 93% of evaluable SPLIS patients had documented evidence of immunodeficiency. Many of the remainder of cases were unevaluable due to lack of available immunological data. Most commonly, SPLIS patients exhibited lymphopenia and T cell-specific lymphopenia, consistent with the established role of the S1P/S1P1/SPL axis in lymphocyte egress. However, low B and NK cell counts, hypogammaglobulinemia, and opportunistic infections with bacterial, viral and fungal pathogens were observed. Diminished responses to childhood vaccinations were less frequently observed. Screening blood tests quantifying recent thymic emigrants identified some lymphopenic SPLIS patients in the newborn period. Lymphopenia has been reported to improve after cofactor supplementation in some SPLIS patients, indicating upregulation of SPL activity. A variety of treatments including immunoglobulin replacement, prophylactic antimicrobials and special preparation of blood products prior to transfusion have been employed in SPLIS. The diverse immune consequences in SPLIS patients suggest that aberrant S1P signaling may not fully explain the extent of immunodeficiency. Further study will be required to fully elucidate the complex mechanisms underlying SPLIS immunodeficiency and determine the most effective prophylaxis against infection.

Indexed as

Aldehyde-LyasesImmunologic Deficiency SyndromesHumansLymphopeniaLysophospholipidsSphingolipidsSphingosineAldehyde-LyasesLysophospholipidsSGPL1 protein, humanSphingolipidsSphingosinesphingosine 1-phosphatesphingosine 1-phosphate lyase (aldolase)ImmunodeficiencyInfectionLymphopeniaSGPL1Sphingosine-1-phosphateSphingosine phosphate lyaseSPLIS

Identifiers

PMID39454238
PMCPMC12671488

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.