Evidence map›Paper›PMID 39454130›Full record

ArticleJournal of the American Society for Mass Spectrometry2024

Fellgett Revisited: On the Nature of Noise in Two-Dimensional Mass Spectrometry.

Callan Littlejohn, Meng Li, Pui Yiu Lam, Mark P Barrow, Peter B O'Connor

Abstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Callan LittlejohnDepartment of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom.
Meng LiAMS-RTP, Millburn House, University of Warwick, Coventry CV4 7AL, United Kingdom.
Pui Yiu LamDepartment of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom.ORCID 0000-0001-5486-091X
Mark P BarrowDepartment of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom.ORCID 0000-0002-6474-5357
Peter B O'ConnorDepartment of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom.ORCID 0000-0002-6588-6274

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two-dimensional mass spectrometry (2DMS) is a truly data-independent acquisition technique used in the analysis of complex mixtures; however, the nature of the noise within these spectra is not well understood. In this work, 2DMS is tested for conformity with the Fellgett principle: (signal/noise) ∝ √ (no. of data points). Since 2DMS functions through the modulation of ions through a fragmentation region across many scans, the individual scans are considered data points in this experiment. Random noise was shown to be prevalent as the main source of noise in this experiment with minor systematic noise. This means that the minimum size for a 2DMS spectrum that displays a target fragment ion can be determined using a fast-2D equation detailed herein. The effects of existing denoising algorithms were also found to change the relationship between the signal-to-noise ratio and the scan numbers to be of a quasi-linear nature rather than the square root trend observed before denoising.

Identifiers

PMID39454130
PMCPMC11622379

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.