Evidence map›Paper›PMID 39454004›Full record

ArticleScience advances2024

Structural basis for regulation of a CBASS-CRISPR-Cas defense island by a transmembrane anti-σ factor and its ECF σ partner.

Diego Bernal-Bernal, David Pantoja-Uceda, Jorge Pedro López-Alonso, Alfonso López-Rojo, José Antonio López-Ruiz, Marisa Galbis-Martínez, Borja Ochoa-Lizarralde, Igor Tascón, Montserrat Elías-Arnanz, Iban Ubarretxena-Belandia and 1 more

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Milestones in the development ofJournal of bacteriology · 2025
    Review
  2. 'Intelligent' proteins.Cellular and molecular life sciences : CMLS · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Diego Bernal-BernalDepartamento de Genética y Microbiología, Área de Genética (Unidad Asociada al IQF-CSIC), Universidad de Murcia, 30100 Murcia, Spain.ORCID 0009-0000-6518-6297
David Pantoja-UcedaInstituto de Química Física "Blas Cabrera," CSIC (IQF-CSIC), 28006 Madrid, Spain.ORCID 0000-0003-4390-6972
Jorge Pedro López-AlonsoInstituto Biofisika (UPV/EHU, CSIC), 48940 Leioa, Spain.ORCID 0000-0003-2081-2607
Alfonso López-RojoDepartamento de Genética y Microbiología, Área de Genética (Unidad Asociada al IQF-CSIC), Universidad de Murcia, 30100 Murcia, Spain.ORCID 0009-0009-8960-8699
José Antonio López-RuizDepartamento de Genética y Microbiología, Área de Genética (Unidad Asociada al IQF-CSIC), Universidad de Murcia, 30100 Murcia, Spain.
Marisa Galbis-MartínezDepartamento de Genética y Microbiología, Área de Genética (Unidad Asociada al IQF-CSIC), Universidad de Murcia, 30100 Murcia, Spain.ORCID 0000-0003-1408-5298
Borja Ochoa-LizarraldeInstituto Biofisika (UPV/EHU, CSIC), 48940 Leioa, Spain.ORCID 0000-0002-5532-0218
Igor TascónInstituto Biofisika (UPV/EHU, CSIC), 48940 Leioa, Spain.ORCID 0000-0003-2526-6238
Montserrat Elías-ArnanzDepartamento de Genética y Microbiología, Área de Genética (Unidad Asociada al IQF-CSIC), Universidad de Murcia, 30100 Murcia, Spain.ORCID 0000-0003-1980-3092
Iban Ubarretxena-BelandiaInstituto Biofisika (UPV/EHU, CSIC), 48940 Leioa, Spain.ORCID 0000-0003-4082-4349
S PadmanabhanInstituto de Química Física "Blas Cabrera," CSIC (IQF-CSIC), 28006 Madrid, Spain.ORCID 0000-0002-8772-0152

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

How CRISPR-Cas and cyclic oligonucleotide-based antiphage signaling systems (CBASS) are coordinately deployed against invaders remains unclear. We show that a locus containing two CBASS and one type III-B CRISPR-Cas system, regulated by the transmembrane anti-σ DdvA and its cognate extracytoplasmic function (ECF) σ DdvS, can defend

Indexed as

CRISPR-Cas SystemsBacterial ProteinsBacteriophagesCatalytic DomainCryoelectron MicroscopyModels, MolecularMyxococcus xanthusProtein MultimerizationSigma FactorBacterial ProteinsSigma Factor

Identifiers

PMID39454004
PMCPMC11506125

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.