Evidence map›Paper›PMID 39453156›Full record

ArticleToxics2024

Computational Tools to Facilitate Early Warning of New Emerging Risk Chemicals.

Farina Tariq, Lutz Ahrens, Nikiforos A Alygizakis, Karine Audouze, Emilio Benfenati, Pedro N Carvalho, Ioana Chelcea, Spyros Karakitsios, Achilleas Karakoltzidis, Vikas Kumar and 6 more

Abstract read
In one paragraph

Article in Toxics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Farina TariqDepartment of Chemistry, Umeå University, 901 87 Umeå, Sweden.
Lutz AhrensDepartment of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences (SLU), 756 51 Uppsala, Sweden.ORCID 0000-0002-5430-6764
Nikiforos A AlygizakisDepartment of Chemistry, National and Kapodistrian University of Athens, 15772 Athens, Greece.ORCID 0000-0002-5727-4999
Karine AudouzeUniversity Paris Cité, INSERM U1124, 75006 Paris, France.ORCID 0000-0001-7525-4089
Emilio BenfenatiDepartment of Environmental Health Sciences, Istituto di Ricerche Farmacologiche Mario Negri IRCCS, 20156 Milano, Italy.ORCID 0000-0002-3976-5989
Pedro N CarvalhoDepartment of Environmental Science, Aarhus University, 8000 Roskilde, Denmark.ORCID 0000-0002-7131-9102
Ioana ChelceaDepartment of Chemistry, Umeå University, 901 87 Umeå, Sweden.ORCID 0000-0002-2129-5210
Spyros KarakitsiosHERACLES Research Center on the Exposome and Health, Center for Interdisciplinary Research and Innovation, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.
Achilleas KarakoltzidisHERACLES Research Center on the Exposome and Health, Center for Interdisciplinary Research and Innovation, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.ORCID 0009-0003-0703-4318
Vikas KumarEnvironmental Analysis and Management Using Computer Aided Process Engineering (AGACAPE), Institut d'Investigació Sanitària Pere Virgili (IISPV), Universitat Rovira i Virgili (URV), 43204 Reus, Spain.ORCID 0000-0002-9795-5967
Liadys Mora LagaresLaboratory for Cheminformatics, Theory Department, National Institute of Chemistry, 1000 Ljubljana, Slovenia.ORCID 0000-0002-6205-4675
Dimosthenis SarigiannisHERACLES Research Center on the Exposome and Health, Center for Interdisciplinary Research and Innovation, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.
Gianluca SelvestrelDepartment of Environmental Health Sciences, Istituto di Ricerche Farmacologiche Mario Negri IRCCS, 20156 Milano, Italy.ORCID 0000-0003-0653-3302
Olivier TaboureauUniversity Paris Cité, INSERM U1124, 75006 Paris, France.ORCID 0000-0001-7081-2491
Katrin VorkampDepartment of Environmental Science, Aarhus University, 8000 Roskilde, Denmark.ORCID 0000-0002-1131-5687
Patrik L AnderssonDepartment of Chemistry, Umeå University, 901 87 Umeå, Sweden.ORCID 0000-0002-2088-6756

Funding

European Union 101057014, HORIZON-HLTH-2021-ENVHLTH-03 HE
6 · The paper itself

Abstract

Innovative tools suitable for chemical risk assessment are being developed in numerous domains, such as non-target chemical analysis, omics, and computational approaches. These methods will also be critical components in an efficient early warning system (EWS) for the identification of potentially hazardous chemicals. Much knowledge is missing for current use chemicals and thus computational methodologies complemented with fast screening techniques will be critical. This paper reviews current computational tools, emphasizing those that are accessible and suitable for the screening of new and emerging risk chemicals (NERCs). The initial step in a computational EWS is an automatic and systematic search for NERCs in literature and database sources including grey literature, patents, experimental data, and various inventories. This step aims at reaching curated molecular structure data along with existing exposure and hazard data. Next, a parallel assessment of exposure and effects will be performed, which will input information into the weighting of an overall hazard score and, finally, the identification of a potential NERC. Several challenges are identified and discussed, such as the integration and scoring of several types of hazard data, ranging from chemical fate and distribution to subtle impacts in specific species and tissues. To conclude, there are many computational systems, and these can be used as a basis for an integrated computational EWS workflow that identifies NERCs automatically.

Indexed as

artificial intelligence (AI)computational toxicologyearly warning system (EWS)effect assessmentexposure assessmentnew and emerging risk chemicals (NERCs)QSARrisk assessment

Identifiers

PMID39453156
PMCPMC11511557

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.