Evidence map›Paper›PMID 39452242›Full record

ReviewAntibiotics (Basel, Switzerland)2024

Molecular Mechanisms of Biofilm Formation in

Kartika Afrida Fauzia, Wiwin Is Effendi, Ricky Indra Alfaray, Hoda M Malaty, Yoshio Yamaoka, Muhammad Mifthussurur

Abstract readReview
In one paragraph

Review in Antibiotics (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Towards EffectiveInternational journal of molecular sciences · 2025
    Review
  10. Challenges and Prospects for Eradication ofPathogens (Basel, Switzerland) · 2025
    Review
  11. Nanomaterials: A Prospective Strategy for Biofilm-FormingInternational journal of nanomedicine · 2025
    Review
  12. International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kartika Afrida FauziaResearch Center for Preclinical and Clinical Medicine, National Research and Innovation Agency, Bogor 16915, Indonesia.ORCID 0000-0001-6901-3270
Wiwin Is EffendiDepartment of Pulmonology and Respiratory Medicine, Faculty of Medicine, Universitas Airlangga, Surabaya 60131, Indonesia.ORCID 0000-0003-3716-2452
Ricky Indra AlfarayDepartment of Environmental and Preventive Medicine-The Research Center for GLOBAL and LOCAL Infectious Disease (RCGLID), Faculty of Medicine, Oita University, Yufu 879-5593, Japan.ORCID 0000-0001-7721-9455
Hoda M MalatyDepartment of Medicine, Baylor College of Medicine, Houston, TX 77030, USA.
Yoshio YamaokaDepartment of Environmental and Preventive Medicine-The Research Center for GLOBAL and LOCAL Infectious Disease (RCGLID), Faculty of Medicine, Oita University, Yufu 879-5593, Japan.ORCID 0000-0002-1222-5819
Muhammad MifthussururHelicobacter pylori and Microbiota Study Group, Institute of Tropical Disease, Universitas Airlangga, Surabaya 60131, Indonesia.ORCID 0000-0003-1415-6033

Funding

REGULATION OF CXC CHEMOKINE EXPRESSION BY H. PYLORIR01DK062813 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI YAMAOKA, YOSHIO · 2004 to 2013
$3.0M
Japan Agency for Medical Research and Development (AMED) [e-ASIA JRP] xxxxJapanese Government (MEXT) scholarship xxxxJapan Society for the Promotion of Science Institutional Program for Young Researcher Overseas Visits and the Strategic Funds for the Promotion of Science and Technology Agency (JST) XXXXXMinistry of Education, Culture, Sports, Science, and Technology (MEXT) of Japan 26640114, 221S0002, 16H06279, 15H02657 and 16H05191, 18KK0266, 19H03473, 21H00346, 22H02871, and 23K24133NIDDK NIH HHS R01 DK062813NIH HHS DK62813Universitas Airlangga XXXX
6 · The paper itself

Abstract

backgroundBiofilm formation in

methodsWe conducted a literature review analysis of the published articles on the

resultsThe results showed that biofilm formation starts as adhesion and progresses through micro-colonies, maturation, and dispersion in a planktonic form. Moreover, specific genes modulate each phase of biofilm formation. Few studies have shown that mechanisms, such as quorum sensing and diffusible signal factors, enhance coordination among bacteria when switching from biofilm to planktonic states. Different protein expressions were also observed between planktonic and biofilm strains, and the biofilm architecture was supported by exopolysaccharides, extracellular DNA, and outer membrane vesicles.

conclusionsThis infrastructure is responsible for the increased survival of bacteria, especially in harsh environments or in the presence of antibiotics. Therefore, understanding the biofilm formation for

Indexed as

biofilm formationH. pylorihuman and healthinfectiontreatment

Identifiers

PMID39452242
PMCPMC11504965

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.