Evidence map›Paper›PMID 39451780›Full record

ArticleCurrent oncology (Toronto, Ont.)2024

Lack of Association Between BsmI and FokI Polymorphisms of the VDR Gene and Sporadic Colorectal Cancer in a Romanian Cohort-A Preliminary Study.

Bianca Petre-Mandache, Emilia Burada, Mihai Gabriel Cucu, Diter Atasie, Anca-Lelia Riza, Ioana Streață, Radu Mitruț, Răzvan Pleșea, Amelia Dobrescu, Andrei Pîrvu and 3 more

Abstract read
In one paragraph

Article in Current oncology (Toronto, Ont.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Bianca Petre-MandacheDoctoral School, University of Medicine and Pharmacy of Craiova, 200349 Craiova, Romania.
Emilia BuradaDepartment of Physiology, University of Medicine and Pharmacy of Craiova, 200349 Craiova, Romania.
Mihai Gabriel CucuLaboratory of Human Genomics, University of Medicine and Pharmacy of Craiova, 200638 Craiova, Romania.ORCID 0000-0001-5847-6480
Diter AtasieDepartment of Clinical Medicine, Faculty of Medicine, "Lucian Blaga" University, 550024 Sibiu, Romania.
Anca-Lelia RizaLaboratory of Human Genomics, University of Medicine and Pharmacy of Craiova, 200638 Craiova, Romania.
Ioana StreațăLaboratory of Human Genomics, University of Medicine and Pharmacy of Craiova, 200638 Craiova, Romania.
Radu MitruțDoctoral School, University of Medicine and Pharmacy of Craiova, 200349 Craiova, Romania.
Răzvan PleșeaLaboratory of Human Genomics, University of Medicine and Pharmacy of Craiova, 200638 Craiova, Romania.ORCID 0000-0003-2686-3878
Amelia DobrescuLaboratory of Human Genomics, University of Medicine and Pharmacy of Craiova, 200638 Craiova, Romania.
Andrei PîrvuLaboratory of Human Genomics, University of Medicine and Pharmacy of Craiova, 200638 Craiova, Romania.
Gabriela Popescu-HobeanuDoctoral School, University of Medicine and Pharmacy of Craiova, 200349 Craiova, Romania.
Paul MitruțDepartment of Medical Semiology, University of Medicine and Pharmacy of Craiova, 200349 Craiova, Romania.
Florin BuradaLaboratory of Human Genomics, University of Medicine and Pharmacy of Craiova, 200638 Craiova, Romania.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal cancer (CRC) is a major public health problem worldwide, currently ranking third in cancer incidence and second in mortality. Multiple genes and environmental factors have been involved in the complex and multifactorial process of CRC carcinogenesis. VDR is an intracellular hormone receptor expressed in both normal epithelial and cancer colon cells at various levels. Several VDR gene polymorphisms, including FokI and BsmI, have been evaluated for their possible association with CRC susceptibility. The aim of our study was to investigate these two SNPs for the first time in Romanian CRC patients. FokI (rs228570 C>T) and BsmI (rs1544410 A>G) were genotyped by real-time polymerase chain reaction (RT-PCR) in 384-well plates using specific TaqMan predesigned probes on a ViiA™ 7 RT-PCR System. A total of 441 subjects (166 CRC patients and 275 healthy controls) were included. No statistically significant difference was observed between CRC patients and controls when we compared the wild-type genotype with heterozygous and mutant genotypes for both FokI (OR 0.85, 95% CI: 0.56-1.28; OR 0.95, 95% CI: 0.51-1.79, respectively) and BsmI (OR 0.97, 95% CI: 0.63-1.49; OR 1.10, 95% CI: 0.65-1.87, respectively) or in the dominant and recessive models. Also, we compared allele frequencies, and no correlation was found. Moreover, the association between these SNPs and the tumor site, TNM stage, and histological type was examined separately, and there was no statistically significant difference. In conclusion, our study did not show any association between FokI and BsmI SNPs and CRC susceptibility in a Romanian population. Further studies including a larger number of samples are needed to improve our knowledge regarding the influence of VDR polymorphism on CRC susceptibility.

Indexed as

Colorectal NeoplasmsGenetic Predisposition to DiseasePolymorphism, Single NucleotideReceptors, CalcitriolAdultAgedCase-Control StudiesCohort StudiesDeoxyribonucleases, Type II Site-SpecificFemaleGenotypeHumansMaleMiddle AgedRomaniaDeoxyribonucleases, Type II Site-Specificendodeoxyribonuclease BsmIendodeoxyribonuclease FokIReceptors, CalcitriolVDR protein, humancolorectal cancergenegenotypesingle nucleotide polymorphismvitamin D receptor

Identifiers

PMID39451780
PMCPMC11505952

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.