Evidence map›Paper›PMID 39450419›Full record

ArticleFrontiers in network physiology2024

On preserving anatomical detail in statistical shape analysis for clustering: focus on left atrial appendage morphology.

Matthew T Lee, Vincenzo Martorana, Rafizul Islam Md, Raphael Sivera, Andrew C Cook, Leon Menezes, Gaetano Burriesci, Ryo Torii, Giorgia M Bosi

Abstract read
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Article in Frontiers in network physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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3 · Its place in the literature

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2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Matthew T LeeUCL Mechanical Engineering, University College of London, London, United Kingdom.
Vincenzo MartoranaDepartment of Economics Management, and Statistics, University of Palermo, Palermo, Italy.
Rafizul Islam MdUCL Medical Physics and Biomedical Engineering, University College of London, London, United Kingdom.
Raphael SiveraUCL Institute of Cardiovascular Science, University College of London, London, United Kingdom.
Andrew C CookUCL Institute of Cardiovascular Science, University College of London, London, United Kingdom.
Leon MenezesBiomedical Research Centre, National Institute for Health and Care Research, University College London Hospitals, London, United Kingdom.
Gaetano BurriesciUCL Mechanical Engineering, University College of London, London, United Kingdom.
Ryo ToriiUCL Mechanical Engineering, University College of London, London, United Kingdom.
Giorgia M BosiUCL Mechanical Engineering, University College of London, London, United Kingdom.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Statistical shape analysis (SSA) with clustering is often used to objectively define and categorise anatomical shape variations. However, studies until now have often focused on simplified anatomical reconstructions, despite the complexity of studied anatomies. This work aims to provide insights on the anatomical detail preservation required for SSA of highly diverse and complex anatomies, with particular focus on the left atrial appendage (LAA). This anatomical region is clinically relevant as the location of almost all left atrial thrombi forming during atrial fibrillation (AF). Moreover, its highly patient-specific complex architecture makes its clinical classification especially subjective. Methods: Preliminary LAA meshes were automatically detected after robust image selection and wider left atrial segmentation. Following registration, four additional LAA mesh datasets were created as reductions of the preliminary dataset, with surface reconstruction based on reduced sample point densities. Utilising SSA model parameters determined to optimally represent the preliminary dataset, SSA model performance for the four simplified datasets was calculated. A representative simplified dataset was selected, and clustering analysis and performance were evaluated (compared to clinical labels) between the original trabeculated LAA anatomy and the representative simplification. Results: As expected, simplified anatomies have better SSA evaluation scores (compactness, specificity and generalisation), corresponding to simpler LAA shape representation. However, oversimplification of shapes may noticeably affect 3D model output due to differences in geometric correspondence. Furthermore, even minor simplification may affect LAA shape clustering, where the adjusted mutual information (AMI) score of the clustered trabeculated dataset was 0.67, in comparison to 0.12 for the simplified dataset. Discussion: This study suggests that greater anatomical preservation for complex and diverse LAA morphologies, currently neglected, may be more useful for shape categorisation via clustering analyses.

Indexed as

atrial fibrillationclustering performance evaluationhierarchical clusteringleft atrial appendage (LAA)principal component analysis -PCAsegmentation (image processing)statistical shape analysis

Identifiers

PMID39450419
PMCPMC11499088

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