Evidence map›Paper›PMID 39449177›Full record

ArticleThe New phytologist2024

Subfamily C7 Raf-like kinases MRK1, RAF26, and RAF39 regulate immune homeostasis and stomatal opening in Arabidopsis thaliana.

Márcia Gonçalves Dias, Bassem Doss, Anamika Rawat, Kristen R Siegel, Tharika Mahathanthrige, Jan Sklenar, Maria Camila Rodriguez Gallo, Paul Derbyshire, Thakshila Dharmasena, Emma Cameron and 4 more

Abstract read
In one paragraph

Article in The New phytologist, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
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  8. microPublication biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Márcia Gonçalves DiasDepartment of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada.ORCID 0000-0002-0751-3920
Bassem DossDepartment of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada.ORCID 0009-0001-1867-3903
Anamika RawatDepartment of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada.ORCID 0000-0001-9081-3547
Kristen R SiegelDepartment of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada.
Tharika MahathanthrigeDepartment of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada.ORCID 0009-0005-6564-3079
Jan SklenarThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0003-1858-2574
Maria Camila Rodriguez GalloDepartment of Biological Sciences, University of Alberta, Edmonton, AB, T6G 2E9, Canada.ORCID 0000-0003-2171-6158
Paul DerbyshireThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0002-5095-9397
Thakshila DharmasenaDepartment of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada.ORCID 0009-0009-3779-2455
Emma CameronDepartment of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada.ORCID 0000-0002-2325-2927
R Glen UhrigDepartment of Biological Sciences, University of Alberta, Edmonton, AB, T6G 2E9, Canada.ORCID 0000-0003-2773-4381
Cyril ZipfelThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0003-4935-8583
Frank L H MenkeThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0003-2490-4824
Jacqueline MonaghanDepartment of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada.ORCID 0000-0002-1770-1669

Funding

Biotechnology and Biological Sciences Research CouncilNatural Sciences and Engineering Research Council of Canada RGPAS-492902-2016Natural Sciences and Engineering Research Council of Canada RGPIN-2016-04787Ontario Ministry of Research and Innovation ER21-16-100
6 · The paper itself

Abstract

The calcium-dependent protein kinase CPK28 regulates several stress pathways in multiple plant species. Here, we aimed to discover CPK28-associated proteins in Arabidopsis thaliana. We used affinity-based proteomics and identified several potential CPK28 binding partners, including the C7 Raf-like kinases MRK1, RAF26, and RAF39. We used biochemistry, genetics, and physiological assays to gain insight into their function. We define redundant roles for these kinases in stomatal opening, immune-triggered reactive oxygen species (ROS) production, and resistance to a bacterial pathogen. We report that CPK28 associates with and trans-phosphorylates RAF26 and RAF39, and that MRK1, RAF26, and RAF39 are active kinases that localize to endomembranes. Although Raf-like kinases share some features with mitogen-activated protein kinase kinase kinases (MKKKs), we found that MRK1, RAF26, and RAF39 are unable to trans-phosphorylate any of the 10 Arabidopsis mitogen-activated protein kinase kinases (MKKs). Overall, our study suggests that C7 Raf-like kinases associate with and are phosphorylated by CPK28, function redundantly in stomatal opening and immunity, and possess substrate specificities distinct from canonical MKKKs.

Indexed as

ArabidopsisArabidopsis ProteinsHomeostasisPlant ImmunityPlant StomataDisease ResistancePhosphorylationProtein BindingProtein Kinasesraf KinasesReactive Oxygen SpeciesArabidopsis ProteinsProtein Kinasesraf KinasesReactive Oxygen SpeciesArabidopsis thalianaC7 Raf‐like kinaseCPK28immunityMRK1RAF26RAF39stomata

Identifiers

PMID39449177
PMCPMC11579443

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.