Evidence map›Paper›PMID 39449090›Full record

ArticleBiology of sex differences2024

Age, sex, and cell type-resolved hypothalamic gene expression across the pubertal transition in mice.

Dustin J Sokolowski, Huayun Hou, Kyoko E Yuki, Anna Roy, Cadia Chan, Wendy Choi, Mariela Faykoo-Martinez, Matt Hudson, Christina Corre, Liis Uusküla-Reimand and 3 more

Abstract read
In one paragraph

Article in Biology of sex differences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Dustin J SokolowskiGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Huayun HouGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Kyoko E YukiGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Anna RoyGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Cadia ChanGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Wendy ChoiGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Mariela Faykoo-MartinezGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Matt HudsonGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Christina CorreGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Liis Uusküla-ReimandGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Anna GoldenbergGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Mark R PalmertGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada.
Michael D WilsonGenetics and Genome Biology, SickKids Research Institute, Toronto, ON, Canada. michael.wilson@sickkids.ca.ORCID 0000-0002-4015-3066

Funding

CIHR 312557CIHR 437197NSERC RGPIN-2019-07014
6 · The paper itself

Abstract

backgroundThe hypothalamus plays a central role in regulating puberty. However, our knowledge of the postnatal gene regulatory networks that control the pubertal transition in males and females is incomplete. Here, we investigate the age-, sex- and cell-type-specific gene regulation in the hypothalamus across the pubertal transition.

methodsWe used RNA-seq to profile hypothalamic gene expression in male and female mice at five time points spanning the onset of puberty (postnatal days (PD) 12, 22, 27, 32, and 37). By combining this data with hypothalamic single nuclei RNA-seq data from pre- and postpubertal mice, we assigned gene expression changes to their most likely cell types of origin. In our colony, pubertal onset occurs earlier in male mice, allowing us to focus on genes whose expression is dynamic across ages and offset between sexes, and to explore the bases of sex effects.

resultsOur age-by-sex pattern of expression enriched for biological pathways involved hormone production, neuronal activation, and glial maturation. Additionally, we inferred a robust expansion of oligodendrocytes precursor cells into mature oligodendrocytes spanning the prepubertal (PD12) to peri-pubertal (PD27) timepoints. Using spatial transcriptomic data from postpubertal mice, we observed the lateral hypothalamic area and zona incerta were the most oligodendrocyte-rich regions and that these cells expressed genes known to be involved in pubertal regulation.

conclusionTogether, by incorporating multiple biological timepoints and using sex as a variable, we identified gene and cell-type changes that may participate in orchestrating the pubertal transition and provided a resource for future studies of postnatal hypothalamic gene regulation.

Indexed as

HypothalamusSex CharacteristicsSexual MaturationAnimalsFemaleGene Expression Regulation, DevelopmentalMaleMiceMice, Inbred C57BL

Identifiers

PMID39449090
PMCPMC11515584

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.