Evidence map›Paper›PMID 39448762›Full record

ArticleScientific reports2024

PTPN11 is a potential biomarker for type 2 diabetes mellitus complicated with colorectal cancer.

Meiling Sun, Zhe Han, Zhimin Luo, Lijuan Ge, Xiaolin Zhang, Keshu Feng, Guoshan Zhang, Fuyi Xu, Hongpan Zhou, Hailin Han and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  3. Review
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Meiling SunDepartment of Clinical Pharmacy, People's Hospital of Shouguang City, Shouguang, Shandong, China.
Zhe HanDepartment of Pharmacy, Binzhou Medical University, Yantai, Shandong, China.
Zhimin LuoDepartment of Pharmacy, Dermatological Hospital of Shouguang City, Shouguang, Shandong, China.
Lijuan GeDepartment of Medical Affairs, People's Hospital of Shouguang City, Shouguang, Shandong, China.
Xiaolin ZhangDepartment of Pharmacy, People's Hospital of Shouguang City, Shouguang, Shandong, China.
Keshu FengDepartment of Pharmacy, Binzhou Medical University, Yantai, Shandong, China.
Guoshan ZhangDepartment of Pharmacy, People's Hospital of Shouguang City, Shouguang, Shandong, China.
Fuyi XuDepartment of Pharmacy, Binzhou Medical University, Yantai, Shandong, China.
Hongpan ZhouDepartment of Clinical Pharmacy, People's Hospital of Shouguang City, Shouguang, Shandong, China.
Hailin HanDepartment of Clinical Pharmacy, People's Hospital of Shouguang City, Shouguang, Shandong, China.
Wenguo JiangDepartment of Pharmacy, Binzhou Medical University, Yantai, Shandong, China. jiangwg@bzmc.edu.cn.

Funding

Science and Technology Development Project of Weifang, China WFWSJK-2023-098The Key R&D Program of Shandong Province, China 2023CXPT012The Natural Science Foundation of Shandong Province, China ZR2023MH218
6 · The paper itself

Abstract

Epidemiological surveys have shown that the incidence of type 2 diabetes mellitus (T2DM) and malignancies is rapidly increasing worldwide and has become a major disease that threatens human life. In this study, we quantitatively analyzed the proteome of tumor tissues and adjacent normal tissues from six patients withT2DM combined with colorectal cancer (CRC) and eight non-diabetic CRC, focusing on the effect of T2DM on tumor tissues. We analyzed the functional enrichment of differentially expressed proteins (DEPs) using clusterProfiler in R and the expression level of protein tyrosine phosphatase non-receptor type 11 (PTPN11) and other key proteins in the TIMER and GEPIA2 databases. The HPA database was used to validate PTPN11 protein expression. The correlation between PTPN11 expression and clinicopathological features was analyzed by UALCAN database. The impact of PTPN11 on clinical prognosis was evaluated utilizing Kaplan-Meier Plotter. The correlation between PTPN11 expression and tumor-infiltrated immune cells was investigated via TIMER and TISIDB databases. Gene set enrichment analysis (GSEA) was performed to examined the pathway of PTPN11 enrichment in CRC using data from The Cancer Genome Atlas (TCGA) database. Furthermore, small interfering (si) RNA was used to knock down PTPN11 in CRC cell line SW480. Western blot analysis was used to detect PTPN11 expression in tissue samples or cells and the effect of PTPN11 knockdown on key proteins related to PI3K/AKT and cell cycle pathway in SW480 cells. Cell proliferation and wound healing assays were used to detect the effects of cell proliferation and migration after knockdown of PTPN11 or treatment with high glucose. We found that metabolic pathways such as oxidative phosphorylation, glycolysis/gluconeogenesis, and insulin secretion were significantly enriched in tumor tissues from diabetic patients compared to non-diabetic patients. In addition, PTPN11, a marker gene associated with T2DM and CRC, were mined in diabetic tumor tissues. PTPN11 showed high expression in diabetic tumor tissues compared to normal tissues. High PTPN11 expression predicted poor prognosis in CRC. PTPN11 expression was strongly associated with immune infiltrating cells in CRC. GSEA analysis revealed that PTPN11 was enriched in cancer-related pathways. Western blotting analysis indicated that PTPN11 knockdown reduced the protein levels of p-PI3K, p-AKT, CDK1 and CYCLIN D, without altering PI3K and AKT protein levels. Cell proliferation and wound healing data showed that PTPN11 and high glucose could increase the proliferation and migration ability. These findings showed that PTPN11 may be a potential key biomarker for CRC in patients with diabetes, which will provide new potential targets for future intervention of T2DM complicated with CRC.

Indexed as

Biomarkers, TumorCell ProliferationColorectal NeoplasmsDiabetes Mellitus, Type 2Protein Tyrosine Phosphatase, Non-Receptor Type 11Cell Line, TumorFemaleGene Expression Regulation, NeoplasticHumansMaleMiddle AgedPrognosisSignal TransductionBiomarkers, TumorProtein Tyrosine Phosphatase, Non-Receptor Type 11PTPN11 protein, humanColorectal cancer (CRC)MetabolismPTPN11Type 2 diabetes mellitus (T2DM)

Identifiers

PMID39448762
PMCPMC11502912

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.