Evidence map›Paper›PMID 39446590›Full record

ArticleACS applied materials & interfaces2024

Generation of a Nonbilayer Lipid Nanoenvironment after Epitope Binding Potentiates Neutralizing HIV-1 MPER Antibody.

Sara Insausti, Ander Ramos-Caballero, Brian Wiley, Saul González-Resines, Johana Torralba, Anne Elizaga-Lara, Christine Shamblin, Akio Ojida, Jose M M Caaveiro, Michael B Zwick and 3 more

Abstract read
In one paragraph

Article in ACS applied materials & interfaces, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Structural basis of membrane engagement and polyreactivity control in HIV-1 MPER broadly neutralizing antibodies.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sara InsaustiInstituto Biofisika (CSIC, UPV/EHU), University of the Basque Country (UPV/EHU), P.O. Box 644, Bilbao 48080, Spain.
Ander Ramos-CaballeroInstituto Biofisika (CSIC, UPV/EHU), University of the Basque Country (UPV/EHU), P.O. Box 644, Bilbao 48080, Spain.
Brian WileyDepartment of Chemistry, University of Bath, Claverton Down, Bath BA2 7AX, United Kingdom.
Saul González-ResinesDepartment of Chemistry, University of Bath, Claverton Down, Bath BA2 7AX, United Kingdom.
Johana TorralbaInstituto Biofisika (CSIC, UPV/EHU), University of the Basque Country (UPV/EHU), P.O. Box 644, Bilbao 48080, Spain.
Anne Elizaga-LaraInstituto Biofisika (CSIC, UPV/EHU), University of the Basque Country (UPV/EHU), P.O. Box 644, Bilbao 48080, Spain.
Christine ShamblinDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California 92037, United States.
Akio OjidaDepartment of Chemical Biology, School of Pharmaceutical Sciences, Kyushu University, Fukuoka 819-0395, Japan.ORCID 0000-0002-9440-8167
Jose M M CaaveiroLaboratory of Protein Drug Discovery, School of Pharmaceutical Sciences, Kyushu University, Fukuoka 819-0395, Japan.ORCID 0000-0001-5568-2369
Michael B ZwickDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California 92037, United States.
Edurne RujasInstituto Biofisika (CSIC, UPV/EHU), University of the Basque Country (UPV/EHU), P.O. Box 644, Bilbao 48080, Spain.
Carmen DomeneDepartment of Chemistry, University of Bath, Claverton Down, Bath BA2 7AX, United Kingdom.ORCID 0000-0001-7115-4232
José L NievaInstituto Biofisika (CSIC, UPV/EHU), University of the Basque Country (UPV/EHU), P.O. Box 644, Bilbao 48080, Spain.ORCID 0000-0001-6446-5649

Funding

HIV-1 vaccine design emphasizing bnAb targets on membrane Env liposomesR01AI143563 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ZWICK, MICHAEL B · 2019 to 2023
$4.0M
NIAID NIH HHS R01 AI143563
6 · The paper itself

Abstract

Establishment of interactions with the envelope lipids is a cardinal feature of broadly neutralizing antibodies (bnAbs) that recognize the Env membrane-proximal external region (MPER) of HIV. The lipid envelope constitutes a relevant component of the full "quinary" MPER epitope, and thus antibodies may be optimized through engineering their capacity to interact with lipids. However, the role of the chemically complex lipid nanoenvironment in the mechanism of MPER molecular recognition and viral neutralization remains poorly understood. To approach this issue, we computationally and experimentally investigated lipid interactions of broadly neutralizing antibody 10E8 and optimized versions engineered to enhance their epitope and membrane affinity by grafting bulky aromatic compounds. Our data revealed a correlation between neutralization potency and the establishment of favorable interactions with small headgroup lipids cholesterol and phosphatidylethanolamine, evolving after specific engagement with MPER. Molecular dynamics simulations of chemically modified Fabs in complex with an MPER-Transmembrane Domain helix supported the generation of a nanoenvironment causing localized deformation of the thick, rigid viral membrane and identified sphingomyelin preferentially occupying a phospholipid-binding site of 10E8. Together, these interactions appear to facilitate insertion of the Fabs through their engagement with the MPER epitope. These findings implicate individual lipid molecules in the neutralization function of MPER bnAbs, validate targeted chemical modification as a method to optimize MPER antibodies, and suggest pathways for MPER peptide-liposome vaccine development.

Indexed as

Antibodies, NeutralizingEpitopesHIV-1HIV AntibodiesHIV Envelope Protein gp41HumansMolecular Dynamics SimulationPhosphatidylethanolaminesAntibodies, NeutralizingEpitopesHIV AntibodiesHIV Envelope Protein gp41Phosphatidylethanolaminesantibody engineeringantibody-membrane interactionHIV-1 antibodylipid nanoenvironmentmembrane deformationmetadynamicsmolecular dynamics simulationssite-selective chemical modification

Identifiers

PMID39446590
PMCPMC11551957

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.